Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01148 ATGTTGTGCCTTAAGGTTTGGTTTTGTGTACTGAGTGTGTTGGGGTTGGCGATTGTGGGTGAAGTTGCCAAGGCTCAAGATTCACCTGCAGACTATTTGAATGGACATAACGCTGCACGATCAGAGGTTGGGGTTGAAAACATAGTTTGGAATGACACGGTTGCTGCTTTTGCACAGAACTATGCTAATCAGCGAAAAGATTGCCAACTGATCCATTCGGGTGGCGGCGGCATATACGGGGAGGATATTGCAATGAGCACCGGTGAGATGAGTGGCACAGAGGCAGTGAAATTGTGGGTGGATGAGAAACCCTACTATGACTACGCTTCTAACTCTTGTATTGGTGGGGAGTGTCGGCACTACACTCAGGTTGTTTGGAGAAAATCGGTGCATCTTGGATGTGCCAAAGTAAGATGCGACAATGGAGGCACCTTCATCACTTGCAACTATTCTCCTCCTGGCAACTATCTTGGCGAAAGACCCTACTAA 489 0.4765 MLCLKVWFCVLSVLGLAIVGEVAKAQDSPADYLNGHNAARSEVGVENIVWNDTVAAFAQNYANQRKDCQLIHSGGGGIYGEDIAMSTGEMSGTEAVKLWVDEKPYYDYASNSCIGGECRHYTQVVWRKSVHLGCAKVRCDNGGTFITCNYSPPGNYLGERPY* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01148 162 Gene3D CAP 27 162 IPR035940 -
Lapu6g01148 162 PRINTS Allergen V5/Tpx-1 family signature 118 134 IPR001283 -
Lapu6g01148 162 PRINTS Allergen V5/Tpx-1 family signature 95 108 IPR001283 -
Lapu6g01148 162 PRINTS Allergen V5/Tpx-1 family signature 145 158 IPR001283 -
Lapu6g01148 162 PRINTS Allergen V5/Tpx-1 family signature 48 66 IPR001283 -
Lapu6g01148 162 ProSitePatterns CRISP family signature 2. 145 156 IPR018244 GO:0005576
Lapu6g01148 162 SMART SCP_3 27 158 IPR014044 -
Lapu6g01148 162 ProSitePatterns CRISP family signature 1. 119 129 IPR018244 GO:0005576
Lapu6g01148 162 SUPERFAMILY PR-1-like 30 162 IPR035940 -
Lapu6g01148 162 Pfam Cysteine-rich secretory protein family 33 150 IPR014044 -
Lapu6g01148 162 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 30 159 IPR001283 -
Lapu6g01148 162 PRINTS Venom allergen 5 signature 48 66 IPR002413 -
Lapu6g01148 162 PRINTS Venom allergen 5 signature 93 108 IPR002413 -
Lapu6g01148 162 PRINTS Venom allergen 5 signature 117 136 IPR002413 -
Lapu6g01148 162 FunFam Putative pathogenesis-related protein 1 26 162 - -
Lapu6g01148 162 CDD CAP_PR-1 29 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01148 Lapu-Chr6 11417755 11418246 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01148 K13449 - gmx:100805116 270.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g01148 6 11417755 11418246 Lapu6g01148 6 11417755 11418246 ECH