Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01147 ATGGTGATGTCCCCATGGCATGTGATCCTAGCCATTTTTGTCTTGGTGTGTACAACAACACTGAGCTTAGCTCAGAGCAGTCCCCAAGACTTTCTTGAGGTGCACAACCAGGCTCGAGGCGAGGTTGGCGTTGGTCCAATGTCCTGGAACCACACCCTTGAAGCCTATGCTCAGAGGTATGCCAATGAGAGGATCCCTGACTGCAACCTTGAACACTCTATGGGACCCTATGGAGAGAATCTGGCAGAAGGGTACGGCGAAATGAAGGGTTCAGATGCTGTGAAGTTCTGGCTCACTGAGAAGCCTTACTATGACTACAAATCCAATTCTTGTGTTCATGACGAGTGTCGGCATTATACTCAGATTGTGTGGCGCAATTCTGTTCATCTAGGTTGTGCTAGAGCTAAGTGTAACAATGGTTGGATGTTTGTCATTTGCAGCTATTCTCCGCCAGGGAACATAGAAGGAGAACGACCTTATTGA 483 0.4803 MVMSPWHVILAIFVLVCTTTLSLAQSSPQDFLEVHNQARGEVGVGPMSWNHTLEAYAQRYANERIPDCNLEHSMGPYGENLAEGYGEMKGSDAVKFWLTEKPYYDYKSNSCVHDECRHYTQIVWRNSVHLGCARAKCNNGWMFVICSYSPPGNIEGERPY* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01147 160 FunFam Putative pathogenesis-related protein 1 25 160 - -
Lapu6g01147 160 CDD CAP_PR-1 28 160 - -
Lapu6g01147 160 SUPERFAMILY PR-1-like 13 160 IPR035940 -
Lapu6g01147 160 PRINTS Allergen V5/Tpx-1 family signature 47 65 IPR001283 -
Lapu6g01147 160 PRINTS Allergen V5/Tpx-1 family signature 93 106 IPR001283 -
Lapu6g01147 160 PRINTS Allergen V5/Tpx-1 family signature 116 132 IPR001283 -
Lapu6g01147 160 PRINTS Allergen V5/Tpx-1 family signature 143 156 IPR001283 -
Lapu6g01147 160 Pfam Cysteine-rich secretory protein family 32 148 IPR014044 -
Lapu6g01147 160 ProSitePatterns CRISP family signature 2. 143 154 IPR018244 GO:0005576
Lapu6g01147 160 ProSitePatterns CRISP family signature 1. 117 127 IPR018244 GO:0005576
Lapu6g01147 160 SMART SCP_3 26 156 IPR014044 -
Lapu6g01147 160 Gene3D CAP 26 160 IPR035940 -
Lapu6g01147 160 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 30 157 IPR001283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01147 Lapu-Chr6 11405910 11406392 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01147 K13449 - gmx:100527778 312.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g01147 6 11405910 11406392 Lapu6g01147 6 11405910 11406392 ECH