Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01142 ATGGATTTTGAATACATTTTGGTGGGGATTACAGCTTCTACTATGGTGCTTCTGTTTGTTCTATTAGGTTCTGCATCGTCAAAGAAGGAGGCCAAAGGTTCAGTGCATGCAGACAACAATGGTGGCGGTATAATAACAACATCATCAGAAAATGGAAACCACCATCAAGAAATTTCACCAACCACAGACATCATCATTGTCGGTGCTGGGGTTGCTGGCGCAGCCCTTGCTTACACACTTGGCAAGGAAGGAAGGCGAGTGCATGTTATTGAAAGGGACTTGACTGAACCAGACAGGATTGTGGGGGAATTGCTACAACCTGGAGGTTATCTCAAGCTAATTGAGTTGGATCTCCAAGATTGTTTGGGTGAGATTGATGCTCAGCAAGTCTTTGGCTATGCTCTTTACAAGGATGGGAAAAATACCAAGCTTTCTTATCCCTTGGAAAAGTTTGACTCTGATGTTTCTGGAAGAAGCTTTCACAATGGTCGTTTCATACAGAGAATGCGAGAAAAAGCTTCAAATCTTCCAAATGTAAAATTAGAACAAGGGACTGTGATATCTCTGCTAGAAGAAAATGGAATCATCAAAGGGGTAAACTACAAAACCAGGAGTGGACAACAGCTCGCAGCTAAAGCTCCCCTCACTATAGTATGTGATGGCTGTTTTTCCAACTTGAGACGTTCTCTTTGCAACCCAAAGGTTGATGTACCCTCTCATTTTGTTGGTCTGGTCCTAGAGAACTGCAATCTTCCATATGCAAACCACGGGCACGTTATCTTGGGTGATCCTTCTCCCATTTTGTTTTATCCCATAAGTAGCACTGAGATTCGGTGTCTGGTTGATGTGCCTGCAGGCCAAAAATTACCTTCCCTTGGTAATGGTGACATGGCTCGTTATTTGAAAACAGTAGTAGCTCCACAGGTTCCCCCAGAGTTGCGTGCTTCTTTTATAGCAGCAGTTGACAAAGGAAACATAAGAAGCATGCCAAACAGAAGCATGCCTGCATCTCCTTATCCCACACCTGGTGCCCTTCTCATGGGGGATGCCTTTAACATGCGTCACCCTTTAACTGGAGGGGGAATGACTGTGGCTTTGTCTGACATTGTTTTGCTAAGGAACCTTCTTAGACCCCTCCAGGATCTTCATGATGCTAATGCTCTTTGCAAATATCTTGAATCATTTTACACCCTGCGCAAGCCAGTGGCATCTACCATAAACACATTGGCTGGAGCATTATACAAGGTGTTTTGTGCATCGCCTGACCCAGCTGGTAAGGAAATGCGCCAGGCATGTTTTGATTATTTAAGCCTTGGAGGTGTTTTCTCAGATGGACCAATATCTCTACTCTCTGGTCTAAATCCTCGTCCATTAAGCCTGGTTCTCCACTTCTTTGCTGTGGCTATATATGGTGTTGGTCGTTTACTAGTACCATTTCCCTCTCCAAAACGCATTTGGATTGGAGCTAGATTGATTTCCGGTGCCTCTGCTATCATTTTTCCCATTATCAGGGCTGAAGGAATTAGACAGATGTTCTTCCCGGTGACTGTGCCAGCATATTACAGAACACCTCCTACCAATTTGCATGATTAA 1593 0.4413 MDFEYILVGITASTMVLLFVLLGSASSKKEAKGSVHADNNGGGIITTSSENGNHHQEISPTTDIIIVGAGVAGAALAYTLGKEGRRVHVIERDLTEPDRIVGELLQPGGYLKLIELDLQDCLGEIDAQQVFGYALYKDGKNTKLSYPLEKFDSDVSGRSFHNGRFIQRMREKASNLPNVKLEQGTVISLLEENGIIKGVNYKTRSGQQLAAKAPLTIVCDGCFSNLRRSLCNPKVDVPSHFVGLVLENCNLPYANHGHVILGDPSPILFYPISSTEIRCLVDVPAGQKLPSLGNGDMARYLKTVVAPQVPPELRASFIAAVDKGNIRSMPNRSMPASPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVLLRNLLRPLQDLHDANALCKYLESFYTLRKPVASTINTLAGALYKVFCASPDPAGKEMRQACFDYLSLGGVFSDGPISLLSGLNPRPLSLVLHFFAVAIYGVGRLLVPFPSPKRIWIGARLISGASAIIFPIIRAEGIRQMFFPVTVPAYYRTPPTNLHD* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01142 530 MobiDBLite consensus disorder prediction 32 56 - -
Lapu6g01142 530 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 212 227 - -
Lapu6g01142 530 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 341 356 - -
Lapu6g01142 530 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 356 372 - -
Lapu6g01142 530 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 63 85 - -
Lapu6g01142 530 Pfam NAD(P)-binding Rossmann-like domain 66 92 - -
Lapu6g01142 530 FunFam Squalene monooxygenase 2 56 437 - -
Lapu6g01142 530 Gene3D - 49 417 IPR036188 -
Lapu6g01142 530 Pfam Squalene epoxidase 212 486 IPR013698 GO:0004506|GO:0016020|GO:0050660
Lapu6g01142 530 SUPERFAMILY FAD/NAD(P)-binding domain 62 438 IPR036188 -
Lapu6g01142 530 MobiDBLite consensus disorder prediction 40 56 - -
Lapu6g01142 530 PANTHER SQUALENE MONOOXYGENASE 46 525 IPR040125 GO:0004506|GO:0016126
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01142 Lapu-Chr6 11363662 11371591 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01142 44 526 Miscellaneous Gene Families AT1G58440 77.226 0.0 786
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01142 K00511 - gmx:100795027 947.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g01142 6 11363662 11371591 Lapu6g01142 6 11363662 11371591 ECH