Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01129 ATGGGAAAAAAACGTGTAATGTTGCCAGCTAAGGACGTTGACATGTCCTCAGTTAAGTACGAAGGTGAAGTGGTTCAAGCTCCGCATTTGACTGGATTTATGTTTAGATTATTTGTGAGGATACTTGAAGCTCCGGTGATCGGTCCTATCATAATGAATGTTTTGAAGAAGCAAAATAAAATTGACCAGATATTGCAGCACACTGTGATACCTGAGGAACCCATGTTTAAGCCCGAATACCCACCTCAAGAAACGGAACCCGGTGTTGTTGTCCTTGAAGAAGATGGGAGACCTGAAGATCGAGTTGAGTCTGCCTTGAAGTGTCTTCCACATTATGACGTTGCTAAATTATGGGAAAATTCACATGCATCCTTTCGGTACTGGAAAATACGTGACTATGCTCACGCTTATCGATCTAGAAAAGTAACCCCATCCATGGTTGCTGAGCGCATCATCTCCATTATAGAGGAGAATGGAAGAAATAAACCTCCTATACCACTATTGATATCCTTTGTGGCAGCAGAAGTCCGGGAGCAAGCAGCAGCATCTACTCAGAGGTTTGAAGCAGGAAACCCATTATCAATATTGGATGGAATTTTTATGGCTATCAAAGATGACATAGATTGTTATCCTCATCCATCTAAGGGTGCATCAACATGGATGCATGAGGTACGCACTGTAAAGAAGGATGCAGTCTGTGTTTCGAAACTGCGTAGCTGCGGTGTCATATTCGTAGGGAAGGCAAATATGCATGAGTTAGGAATGGGTACAACAGGAAATAATCCTAATTATGGAACGGCAAGAAATCCTCATGCACCCGATAGGTATACTGGTGGATCTTCGTCAGGTCCAGCTGCAATTGTTGCTTCTGGAATATGTTCTGCTGCATTGGGAACTGATGGTGGAGGTTCAATCCGTATTCCTTCTTCCCTTTGTGGTGTTGTGGGATTGAAGACAACATATGGACGGACAAGCATGGAGGGGTCATTATGTGATTCTGGGACAGTGGAAATTATTGGTCCCATTGCTTCATCAGTAGAGGACGTCATGCTAGTGTATGCGGCAATGTTGGGGGCATCTCCTGCAAATAAAATCAGTTTAAGACCGTCACCACCTTGTTTGCCAACTCTGTCATCCAATGACTATTCAAATGCCTTGGGATCTTTAAGAATAGGAAAGTACACCCCGTGGTTTAATGACGTGCATTCAACTGAAATCTCTGCTAAATGCGAGGATGCACTTAATCTGCTGTCAAAGGAGCATGGTTGTGAAATGATAGAAATTGTTATACCAGAGCTTCTTGAGATGAGAACTGCTCATGTCGTTTCCATTGGTTCTGAATGCTTATGTTCGCTGAATCCAGATTGTGAAGACGGGAAAGGTGTAAAACTGACATATGATACTCGGACAAGTTTGGCACTTTTTCGGTCATTTACTGCGGCAGATTATGTTGCAGCCCAATGTATTAGACGAAGGAATATGTATTACCACATGGAGATTTTCAAGAAAGTGGATGTCATAGTAACTCCGACCACTGGCATGACAGCACCCAAAATACCTCCTAGTGCTCTTAAAAGTGGTGAAACAGATATGCAGACTACAGCTAACCTTATGCAGTTCGTTGTTCCGGCAAATCTTCTTGGACTTCCAGCCATTTCTGTCCCGGTTGGTTACGATAAAGAAGGACTTCCAATAGGTTTGCAAATAATGGGTGGACCATGGGCGGAAGCAACTATTCTGCGGGTAGCCTCTGCAGTAGAGAAACTCTGCGGTGAGTCAAAGAACAAGCCCGTCTCCTACTATGATATTCTGAAGGCTAACTGA 1824 0.4342 MGKKRVMLPAKDVDMSSVKYEGEVVQAPHLTGFMFRLFVRILEAPVIGPIIMNVLKKQNKIDQILQHTVIPEEPMFKPEYPPQETEPGVVVLEEDGRPEDRVESALKCLPHYDVAKLWENSHASFRYWKIRDYAHAYRSRKVTPSMVAERIISIIEENGRNKPPIPLLISFVAAEVREQAAASTQRFEAGNPLSILDGIFMAIKDDIDCYPHPSKGASTWMHEVRTVKKDAVCVSKLRSCGVIFVGKANMHELGMGTTGNNPNYGTARNPHAPDRYTGGSSSGPAAIVASGICSAALGTDGGGSIRIPSSLCGVVGLKTTYGRTSMEGSLCDSGTVEIIGPIASSVEDVMLVYAAMLGASPANKISLRPSPPCLPTLSSNDYSNALGSLRIGKYTPWFNDVHSTEISAKCEDALNLLSKEHGCEMIEIVIPELLEMRTAHVVSIGSECLCSLNPDCEDGKGVKLTYDTRTSLALFRSFTAADYVAAQCIRRRNMYYHMEIFKKVDVIVTPTTGMTAPKIPPSALKSGETDMQTTANLMQFVVPANLLGLPAISVPVGYDKEGLPIGLQIMGGPWAEATILRVASAVEKLCGESKNKPVSYYDILKAN* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01129 607 Pfam Amidase 169 580 IPR023631 -
Lapu6g01129 607 PANTHER TRANSAMIDASE 121 604 IPR000120 GO:0003824
Lapu6g01129 607 ProSitePatterns Amidases signature. 278 309 IPR020556 -
Lapu6g01129 607 Gene3D Amidase signature (AS) domain 130 590 IPR036928 -
Lapu6g01129 607 SUPERFAMILY Amidase signature (AS) enzymes 109 590 IPR036928 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01129 Lapu-Chr6 11264354 11274424 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01129 1 607 Acyl Lipid Metabolism Gene Families AT5G64440 67.928 0.0 869
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01129 - - gmx:100800479 1136.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g01129 6 11264354 11274424 Lapu6g01129 6 11264354 11274424 ECH