Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01029 ATGCCTCCAACACTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTCTTTTCTCCTCCGCACACCTCTCCCCGCAACTCAACCACACCTCCTTCTCACTCTCCTTCCCTCTCACCCCACTCCCTCTCTCCTCCAACACCGCCTCCAAGATGCTACGCGACTCTCTCATTGCCAACTCAAACCGCACCAGAAACAGCACGCGACTCACCTCGCCTTCTTCTCCTTATAACTACAAGCTAACCTTCAAATACTCCATGGCTTTAATCGTCAACCTTCCCATTGGAACACCACCGCAGGTTCAGCCCATGGTCTTGGACACCGGAAGCCAACTCTCCTGGATTCAGTGTCACAGAAAAGCACCCAAGAGACCTCCCCCAACGGCGTCCTTTGACCCTTCTCTCTCCTCCACTTTCTCCACTCTTCCCTGTACTCACCCTGTTTGCAAACCACGAATCCCCGATTTTACCCTCCCCACTTCCTGCGACCAGAACCGCCTCTGCCACTACTCCTACTTCTACGCCGACGGCACCTATGCCGAGGGAAATCTCGTCAGAGAAAAATTCACTTTCTCCCGTTCCCTTTTCACCCCTCCTTTGATCCTCGGCTGCGCCACGGAGTCCACCGACCCCAGGGGCATTTTGGGAATGAACCGTGGGCGCCTCTCCTTCGCTTCTCAATCCAAAATTACCAAATTCTCCTACTGCGTCCCCACCCGACAAACCCGACCCGGCTCCACTCCAACAGGATCGTTCTACCTAGGCCACAACCCCAACTCTCTCCGGTTTCGGTTTATCCAAATGTTGACTTTTTCTCAGAGTCAACGCATGCCCAATCTTGACCCCTTGGCTTACACCGTCGCCTTGCAGGGGATTAGAATCGGGGGGAGAAAACTGAACATATCACCGGCAGTTTTTCGTGCTGACGCTGGCGGGTCGGGTCAAACCATGATTGACTCCGGATCCGAGTTTACTTACCTTGTTAATGAGGCATATGAGAAGGTGCGGGCGGAAGTAGTGAGGGCTGTGGGGCCCAGGATGAAGAAGGATTACGTGTACGGTGGCGTTGCGGACATGTGTTTTGATGGGAATGCAGTTGAGATCGGACGGCTGATAGGGGATATGGTGTTCGAGTTCGAGAAGGGCGTGGAAATAGTGATTCCCAAAGAGAGAGTTCTTGCTTCCGTGGAGGGTGGGGTCCACTGCGTCGGGATTGCTAACTCTGATAAATTGGGTGCGGCCAGTAACATCATTGGGAATTTCCATCAGCAGAATCTGTGGGTGGAGTTTGATCTCGCCAATCGCAGAGTGGGTTTCGGTGCGGCTGATTGTAGCAGATTGGCACAATAG 1350 0.5296 MPPTLFFFFFFFFFFFSLFSSAHLSPQLNHTSFSLSFPLTPLPLSSNTASKMLRDSLIANSNRTRNSTRLTSPSSPYNYKLTFKYSMALIVNLPIGTPPQVQPMVLDTGSQLSWIQCHRKAPKRPPPTASFDPSLSSTFSTLPCTHPVCKPRIPDFTLPTSCDQNRLCHYSYFYADGTYAEGNLVREKFTFSRSLFTPPLILGCATESTDPRGILGMNRGRLSFASQSKITKFSYCVPTRQTRPGSTPTGSFYLGHNPNSLRFRFIQMLTFSQSQRMPNLDPLAYTVALQGIRIGGRKLNISPAVFRADAGGSGQTMIDSGSEFTYLVNEAYEKVRAEVVRAVGPRMKKDYVYGGVADMCFDGNAVEIGRLIGDMVFEFEKGVEIVIPKERVLASVEGGVHCVGIANSDKLGAASNIIGNFHQQNLWVEFDLANRRVGFGAADCSRLAQ* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01029 449 Gene3D Acid Proteases 47 255 IPR021109 -
Lapu6g01029 449 ProSiteProfiles Peptidase family A1 domain profile. 89 440 IPR033121 -
Lapu6g01029 449 PANTHER OS07G0603500 PROTEIN-RELATED 38 444 - -
Lapu6g01029 449 SUPERFAMILY Acid proteases 90 447 IPR021109 -
Lapu6g01029 449 Gene3D Acid Proteases 259 448 IPR021109 -
Lapu6g01029 449 FunFam Aspartyl protease family protein 68 251 - -
Lapu6g01029 449 FunFam aspartic proteinase PCS1 255 448 - -
Lapu6g01029 449 Pfam Xylanase inhibitor C-terminal 284 440 IPR032799 -
Lapu6g01029 449 CDD pepsin_A_like_plant 90 444 IPR034161 -
Lapu6g01029 449 Pfam Xylanase inhibitor N-terminal 90 245 IPR032861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01029 Lapu-Chr6 10340686 10342035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01029 91 449 Miscellaneous Gene Families AT1G44130 23.116 4.27e-21 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01029 - - var:108326882 809.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g01029 6 10340686 10342035 Lapu6g01029 6 10340686 10342035 ECH
Lapu6g01029 6 10340686 10342035 Lapu6g01029 6 10340686 10342035 PCT