Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01001 ATGGTAGCCCTTCTACTTTTTCTACTAACTAGTCTTGGCTTAGTAATCAATGCATCAACCCTTAATTCTTGTTCAAATTGCGGAAACTCTATTGTCCCATATCCTCTCAGCACAAATGAGAATTGTGGAGACAAAAGGTACAAAGTTTACTGCAATGATGAACAGTTAGAGTTCCTTTCTGCAACAGGAACTTACTATAAGATCCTTAGAATTGATCCAAGTACTAACAAACTTGTGATTAAGCCACCCCTTATCTCAAAAAATACTTGTTATTCTTCTGATCTCTTAATGGGAGGCTTGTTGCTTGATGAAAGCTTGCCTTTCAATATATCTTCACAGAACACAGTGTTGTTGTTTAATTGCAGTGATAATATCCTTCAATCTCCACTCAATTGTACTTCAAATAGTATTTGCAGGCAGTTTGAGAGAAAGGTGGAAGAAGGATCTGGGTGTATGGACACCCTTTGTTGTCATTACTTAAAGGACTCGGCCATGAATTCCCATAAGATTAGAGTCAGGTTTGGGAGTTGCACTGCTTACACTTGTTTGGTGGGTTTCACGCCTGATGACCCTCTTGAAACTTGGAATTATGGGATTGAGATACAATGGTTGTCTCCCAATTGA 624 0.3862 MVALLLFLLTSLGLVINASTLNSCSNCGNSIVPYPLSTNENCGDKRYKVYCNDEQLEFLSATGTYYKILRIDPSTNKLVIKPPLISKNTCYSSDLLMGGLLLDESLPFNISSQNTVLLFNCSDNILQSPLNCTSNSICRQFERKVEEGSGCMDTLCCHYLKDSAMNSHKIRVRFGSCTAYTCLVGFTPDDPLETWNYGIEIQWLSPN* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01001 207 Pfam Wall-associated receptor kinase galacturonan-binding 24 80 IPR025287 GO:0030247
Lapu6g01001 207 PANTHER WALL-ASSOCIATED RECEPTOR KINASE CARBOXY-TERMINAL PROTEIN-RELATED 5 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01001 Lapu-Chr6 10125571 10126194 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01001 24 207 Receptor kinase-like Gene Family AT5G02070 39.267 8.69e-40 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01001 - - tpra:123890956 332.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g01001 6 10125571 10126194 Lapu6g01001 6 10125571 10126194 ECH