Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00997 ATGAAGACGGGCTCCATGATTTTTTCATTATTACATCTACCTAGATGTAGAATACAACGATTAGCTAATTACTGGGGAGAAACCTTCCACAGTTTCAGTACGACTTGTGGAAACAATTCTTGCATCAGGCCGCTTGGTTATAGAATTTATGGTCTTCAGGGAGGACAGAGAAAGAAGTGGACAAGACCTATAACTACAAATACAGAAGGCAAGGGGAGCACCAAATCAAAAAGTATCAAGCATGAAATTTTGAGTGAAACCATTGTAACAGGTGCTACAGTAGATGTAAATAAAACACAGCGAGATCAATTCCAGGAAATTCAGTACTATGACATACAACAAGAGATTGCTCAGAATAAAGACTTGTCTAGTTTAGTTACTGTTATTGTTTTTGATATTGAGACCACGGGGCTTAGCAGAGAGAATGAAAGAATCATTGAAATTGCACTTCGAGATCTTCAGGGTGGTGAGAACAGCACTTTTCAGACTCTTGTCAACCCTCAATGCAAAGTTCCTAATTCACGTATTCATGGCATTACTACTCAGATGGTCAACAAACCTGATATTCCAAGGATGGAGGACCTAATTCCTATCTTATTGCAATATGTTCGAAGTCGTGAGAAGCCCGGGGGACATGTGTTATTTGTTGCTCATAATGCTCGTTGTTTTGATGTCCCCTTCATCATGAATGAATTACGACGTTATTCTATGAACATTCCTCCTAATTGGTTGTTTTTAGACACCCTGCCTTTAGCACGTGAACTAATGAAATCTGGAGGAACTGAACTTTCTTCAACTTCCCTTGCTGCCCTTCGTGACCTCTACGGAATTAAAGTGGATGGATCAGCTCACAGGGCCATGGTGGATGTAAACACATTATCCTTGATTCTTCCCAGGTTGACCTGTGATATGAAATTGACCCTTTCTGATCTTGTCAAAAAATCATTCAAAGAATCAGATATTATCAACTCCAAGAAGAAGAAAATTTTAGACTAG 996 0.3926 MKTGSMIFSLLHLPRCRIQRLANYWGETFHSFSTTCGNNSCIRPLGYRIYGLQGGQRKKWTRPITTNTEGKGSTKSKSIKHEILSETIVTGATVDVNKTQRDQFQEIQYYDIQQEIAQNKDLSSLVTVIVFDIETTGLSRENERIIEIALRDLQGGENSTFQTLVNPQCKVPNSRIHGITTQMVNKPDIPRMEDLIPILLQYVRSREKPGGHVLFVAHNARCFDVPFIMNELRRYSMNIPPNWLFLDTLPLARELMKSGGTELSSTSLAALRDLYGIKVDGSAHRAMVDVNTLSLILPRLTCDMKLTLSDLVKKSFKESDIINSKKKKILD* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00997 331 SMART exoiiiendus 127 306 IPR013520 -
Lapu6g00997 331 Pfam Exonuclease 129 293 IPR013520 -
Lapu6g00997 331 SUPERFAMILY Ribonuclease H-like 125 303 IPR012337 -
Lapu6g00997 331 Gene3D - 126 318 IPR036397 GO:0003676
Lapu6g00997 331 CDD DEDDh 129 297 - -
Lapu6g00997 331 FunFam Exonuclease DPD1 chloroplastic/mitochondrial 126 310 - -
Lapu6g00997 331 PANTHER THREE PRIME REPAIR EXONUCLEASE 1, 2 61 325 IPR040393 GO:0008408
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00997 Lapu-Chr6 10101247 10105755 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00997 - - gmx:100799702 568.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00997 6 10101247 10105755 Lapu6g00997 6 10101247 10105755 ECH