Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00988 ATGTGGAGCTCAACAACGAGGATGTCGCTGGCCGTTGCAGCCATAACGCTTATGATGTTTCTCTCATCGGCTTCAGCCGACGTCGTTGCGCTCACCGAGAACACCTTCGAAAACGAGGTTGGCAAGGATCGTGGCGCTCTCGTCGAGTTTTACGCCCCCTGGTGTGGACATTGTAAAAGGCTTGCCCCCGAGTACGAACAACTCGGAACGACTTTCAAGAAAGCGAAGTCGGTTTTGATTGCGAAGGTGGATTGTGATGAACATAAAAGCGTTTGCGGTAAATATGGGGTTTCTGGTTACCCTACCATTCAATGGTTTCCTAAGGGATCTCTAGAACCTAAAAAGTATGAAGGTGCACGTTCTGCAGAAGCCCTTGCTGCGTTTGTGAACCTTGAAGCAGGCACTAATGTGAAGATAGCTTCTGTTCCATCCAGCGTGGTTATTCTCTCTACAGATAACTTTGATGAGGTTGTCTTGGATCAAACAAAAGATGTTCTGGTGGAATTCTATGCACCATGGTGTGGTCATTGCAAGGCCCTTGCCCCTACCTATGAAAAGGTTGCTGCAGCATTTAACCTGGATGAAGAAGTAGTTATAGCCAATGTTGATGCTGACAAGTATAAGAATTTGGCTGAGAAATATGGTGTTAGTGGCTATCCTACACTGAAGTTTTTCCCAAAGAGCAATAAAGCTGGTGAAGATTATAATGGTGGTCGTGATTTGGATGATTTTGTAGCCTTCATCAATGAGAAATGTGGTACCTACCGTGATGGGAAGGGGCAACTTAGTCCTAAAGCTGGTATAATAGAATCTCTGGATGACTTGGTGAAGGAGTTTGTGAGTGCCGATGATAATGAGAAAAAGGCAGTATATTCCCAGCTCGAGGAGGAAGTTAAGAAGCTTAAGGGTTCCGCTGCCAGACATGGCAACCTCTACTTAAAACTTGCTGGAAAGAGTATGGAAAAGGGTCCGGACTATGCAAAGAATGAAATTAATCGACTTGACCGCATGCTTGAGAAGTCAATCAGCCCAGCGAAAGCAGATGAATTCACTCTGAAGAAGAACATCTTATCCACATTTGTTTGA 1086 0.4494 MWSSTTRMSLAVAAITLMMFLSSASADVVALTENTFENEVGKDRGALVEFYAPWCGHCKRLAPEYEQLGTTFKKAKSVLIAKVDCDEHKSVCGKYGVSGYPTIQWFPKGSLEPKKYEGARSAEALAAFVNLEAGTNVKIASVPSSVVILSTDNFDEVVLDQTKDVLVEFYAPWCGHCKALAPTYEKVAAAFNLDEEVVIANVDADKYKNLAEKYGVSGYPTLKFFPKSNKAGEDYNGGRDLDDFVAFINEKCGTYRDGKGQLSPKAGIIESLDDLVKEFVSADDNEKKAVYSQLEEEVKKLKGSAARHGNLYLKLAGKSMEKGPDYAKNEINRLDRMLEKSISPAKADEFTLKKNILSTFV* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00988 361 Gene3D - 265 361 IPR036356 -
Lapu6g00988 361 ProSiteProfiles Thioredoxin domain profile. 138 253 IPR013766 -
Lapu6g00988 361 SUPERFAMILY ERP29 C domain-like 266 361 IPR036356 -
Lapu6g00988 361 ProSitePatterns Thioredoxin family active site. 166 184 IPR017937 -
Lapu6g00988 361 Gene3D Glutaredoxin 18 138 - -
Lapu6g00988 361 Pfam Thioredoxin 28 130 IPR013766 -
Lapu6g00988 361 Pfam Thioredoxin 146 249 IPR013766 -
Lapu6g00988 361 Pfam Endoplasmic reticulum protein ERp29, C-terminal domain 267 360 IPR011679 GO:0005783
Lapu6g00988 361 NCBIfam protein disulfide-isomerase domain 31 130 IPR005788 GO:0003756
Lapu6g00988 361 NCBIfam protein disulfide-isomerase domain 149 251 IPR005788 GO:0003756
Lapu6g00988 361 CDD PDI_a_ERp38 145 248 - -
Lapu6g00988 361 PRINTS Thioredoxin family signature 165 173 - -
Lapu6g00988 361 PRINTS Thioredoxin family signature 215 226 - -
Lapu6g00988 361 PRINTS Thioredoxin family signature 173 182 - -
Lapu6g00988 361 FunFam Protein disulfide-isomerase A6 homolog 21 139 - -
Lapu6g00988 361 CDD PDI_a_ERp38 27 129 - -
Lapu6g00988 361 SUPERFAMILY Thioredoxin-like 26 130 IPR036249 -
Lapu6g00988 361 Gene3D Glutaredoxin 139 261 - -
Lapu6g00988 361 CDD ERp29c 269 360 IPR011679 GO:0005783
Lapu6g00988 361 FunFam Protein disulfide-isomerase A6 homolog 140 258 - -
Lapu6g00988 361 SUPERFAMILY Thioredoxin-like 143 255 IPR036249 -
Lapu6g00988 361 ProSiteProfiles Thioredoxin domain profile. 6 134 IPR013766 -
Lapu6g00988 361 PANTHER PROTEIN DISULFIDE-ISOMERASE C17H9.14C-RELATED 142 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00988 Lapu-Chr6 10020171 10025233 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00988 K09584 - gmx:100796355 653.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00988 6 10020171 10025233 Lapu6g00988 6 10020171 10025233 ECH