Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00974 ATGGCAGACCTGGAAAACATGCTTCTTGAGGCAGCTGGACGGACTAGTTCTCCCGTGAGAAAGCGGCACAAGCCTCGGAACTCGAAATCCAAACGTGAGGGTGGTGCGGCATTCTCTGATGGTGGAAGTAATTCTAGAGAAGAAGACTCTGACGAGGGCGCAAACAAGAAACCACAGAGGTATTCATCTCATGTTCCACTTAAGAAGAGATTAGACATGAGCAGAAGAAGTAGTAATAATAGTACTCGCAATGAGCATGGTGGGGGTGACTTGGACGACGGAGTTCCTGATAAAGATGGTGGCAGCAGTGAGGAATCTGACGTTGGCAGGGATCTCTACAAGAACGAAGACGACAAACAGAAGCTTGCAAATATGACAGAACTTGAAAGGGAGATGATTTTGTCTGATAGAGCAACCAAAAAAAGTGAAAAGGAATTCAAAGAGAAAATGAGGTTGAAGAGGGAAAACAAAAATGCAAGTGCAAAGACTAGTTCAGCAGCAAATTCATCTCATCATCCATCATCTACCAAGGTTCGTTCCTCGGCCAGACATGCTGAGAGGACGGCTTCCAAGGGAGATGTTCTGAGTGAATTGCGTGCGAAGAGGATGAAGCAACAAATCTTAGACCCTCCTGATAAATTGGGAAAGGCTTCAGGACCAGGCTCAAGTAGCAAGTCGAAACCTGGGATCACGGCAAGTCCAAGTAGCTCTAGTCAGAGTGAGAGTGTTATTCGGTCTGACAGTGAAAGAGACTCATCTGATGACGGTGGATTGGGTGACAGCGATGATGACAAGAACATTCACGAATCAAAGATGCCAACATTTGAAAACATTAGGGAAATCACCATTAGGAGGTCAAAGCTCGTGAAGTGGTTGAACGAACCATTTTTTGAGGAGTTAATTGTCGGATGTTTTGTCAGAATTGGCATAGGAAAGTCAGAAACTGGACCTGTTTACAGGCTCTGCTTAGTGCAGAGAGTTGATGGAGGTGACCCAAATAAGCATTACAAGGTAGAAAATAGAGTCACCCACAAGTATCTAGTTTGTGTGTGGGGCAGTGAGAACTCTGCTAAAAAGTTTCAGGTGGCTGTAGTTTCAGATTCTGCACCTTTGGAAAAAGAGTTCAGACAGTGGGTTAGAGAGGTTGAAAGAACTTGCAGCCAAATGCCGAGTAAGACGAGTGTGTTGGAGAAGAAGGAAGCCATAAGAAGAACAAGCGCGTATGTTTATTCAGCTGCCACTGTGAAGCAGATGCTAGAGGAGAAAAAATCAGCCCCATCTAGGCCACTGAACATTGCAGTGGAGAAGGATCGTTTGAAGAATCTGTTGGAGGTTGCAAAATGTAAGAATGATGAAGCAGAGATGGACAGGATCTTGAGAAAGCTCTCGGATTTGGAAGCATCTCGTAAATCCCGGGAGAATGATGCCAAGGCTTTGAGGCTGGCTGAGATGAACAGGAAGAACAAGGTTGAGAACTTCAAGAACTTGTCTGAACATAAACAGTTGAATGCGAATTTGAAAGCTGGTGAGGCAGGCTATGATCCCTTTTCGAGAAGGTGGACAAGGTCGAGGAATTACTACGGTAAAGATACTGAGAAGAATGAAGATAAAGGGGATAACAATGGTGCAGTTAGTAAGGGGGAAGAGAAAGAAGAAGCTGTTACAACAAAGGTTGGTGTTGAAGTCACAGAATTGGCATTGCAAGCAGCTGCCGTTGAAGGGAAGTTGATTGATACCAATGCTCCGGTGGATGGTGGAACAGAATCAAACATGCTGCATGATTTCGAGTTGCCTATCTCTTTGGCTGAACTCAAGAATTTTGGTGGACCACAGGGACTCAAGAATGGATTTCTGGCAAGGAAACAAAAAGTAGAAGCAACAGTTGGGTGCCGGGTTTCTGAGAATGATGGGAGTAGGCATGCACTTACGTTAACTATAAGTGACTACAAGAGAAGAAGAGGACTTCTGTGA 1971 0.4475 MADLENMLLEAAGRTSSPVRKRHKPRNSKSKREGGAAFSDGGSNSREEDSDEGANKKPQRYSSHVPLKKRLDMSRRSSNNSTRNEHGGGDLDDGVPDKDGGSSEESDVGRDLYKNEDDKQKLANMTELEREMILSDRATKKSEKEFKEKMRLKRENKNASAKTSSAANSSHHPSSTKVRSSARHAERTASKGDVLSELRAKRMKQQILDPPDKLGKASGPGSSSKSKPGITASPSSSSQSESVIRSDSERDSSDDGGLGDSDDDKNIHESKMPTFENIREITIRRSKLVKWLNEPFFEELIVGCFVRIGIGKSETGPVYRLCLVQRVDGGDPNKHYKVENRVTHKYLVCVWGSENSAKKFQVAVVSDSAPLEKEFRQWVREVERTCSQMPSKTSVLEKKEAIRRTSAYVYSAATVKQMLEEKKSAPSRPLNIAVEKDRLKNLLEVAKCKNDEAEMDRILRKLSDLEASRKSRENDAKALRLAEMNRKNKVENFKNLSEHKQLNANLKAGEAGYDPFSRRWTRSRNYYGKDTEKNEDKGDNNGAVSKGEEKEEAVTTKVGVEVTELALQAAAVEGKLIDTNAPVDGGTESNMLHDFELPISLAELKNFGGPQGLKNGFLARKQKVEATVGCRVSENDGSRHALTLTISDYKRRRGLL* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00974 656 MobiDBLite consensus disorder prediction 159 176 - -
Lapu6g00974 656 MobiDBLite consensus disorder prediction 527 555 - -
Lapu6g00974 656 MobiDBLite consensus disorder prediction 1 271 - -
Lapu6g00974 656 MobiDBLite consensus disorder prediction 219 243 - -
Lapu6g00974 656 ProSiteProfiles Plus3 domain profile. 272 407 IPR004343 GO:0003677
Lapu6g00974 656 FunFam RNA polymerase-associated protein RTF1 273 405 - -
Lapu6g00974 656 Gene3D - 272 405 IPR036128 GO:0003677
Lapu6g00974 656 PANTHER UNCHARACTERIZED 236 655 - -
Lapu6g00974 656 MobiDBLite consensus disorder prediction 179 209 - -
Lapu6g00974 656 Coils Coil 436 475 - -
Lapu6g00974 656 MobiDBLite consensus disorder prediction 86 158 - -
Lapu6g00974 656 SUPERFAMILY Plus3-like 274 403 IPR036128 GO:0003677
Lapu6g00974 656 SMART rtf1 272 384 IPR004343 GO:0003677
Lapu6g00974 656 MobiDBLite consensus disorder prediction 44 58 - -
Lapu6g00974 656 MobiDBLite consensus disorder prediction 244 271 - -
Lapu6g00974 656 Pfam Plus-3 domain 277 382 IPR004343 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00974 Lapu-Chr6 9893886 9895856 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00974 K15178 - gmx:100793188 1021.92