Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00966 ATGGGTAGTGGCGGTGCATTCTCGCATCTCATTCTCACTGCAATCGCAATAGCGATAGCAATTCCATTGGTTGCCTGCGATACGCCTCCGGTGCTGTTCGTCTTCGGCGATTCCAACTCCGACACCGGTGGACTCGCTTCCGGACTCGGTTTCCCTATCAATCTTCCCAATGGCCGCACTTTCTTCCGCAGATCCACTGGTCGCTTGTCCGATGGACGCCTCGTCATCGACCTACTCTGCCAAAGTTTGAATGCAAGTTTATTGGTACCATACTTGGACGCCTTGTCCGGAACCTCATTCACAAATGGAGCAAACTTTGCAGTGGTGGGGTCCTCTACTCTCCCCAAATATGTTCCTTTCTCCTTAAATATACAGGTCATGCAATTTCGGCGTTTCAAAGCTCGCTCTCTTGATCTTGTTACGGCAGGTGCTAGAAATTTCATCAATGACGAAGGCTTCCGTAATGCACTCTACTTGATTGATATTGGGCAAAACGACATTGCTGATTCATTTGCCAAAAACCTGTCATACGCACAAGTCATTAAGAAGATCCCATCATTTATAACTGAGATTGAGAATGCTGTTAAGAATTTACATAATGAAGGTGCCAGGAAGTTTTGGGTTCACAATACTGGGCCATTGGGCTGTCTTCCAAAAATACTTGCACTGGCTCAAAAGAAGGATCTAGATTCATTGGGATGTCTTTCTAGCTATAACTCTGCAGCAAGATTGTTTAATGAAGCGCTGCTTCATTTGAGTCAGAAACTAAGATCTGAACTGAAGGATTCTACTTTAGTCTACGTTGATATTTATGCCATTAAGTATGACCTCATTACAAATGCCGCAAAATATGGTTTCTCAAATCCGTTGATGGTATGTTGCGGCTTTGGAGGGCCTCCTTACAACTTTGACGTAAGGGTAACATGTGGTCAACCTGGTTATCAGGTTTGTGGCGAAGGGGCTCGGTATGTAAGCTGGGATGGAATTCATCATACTGAAGCCGCAAATACGCTGATAGCTTCTAAGATACTTTCCATGGCTTATTCCACACCGCGGACACCTTTTGATTTCTTTTGGCGCCGCTGA 1086 0.4512 MGSGGAFSHLILTAIAIAIAIPLVACDTPPVLFVFGDSNSDTGGLASGLGFPINLPNGRTFFRRSTGRLSDGRLVIDLLCQSLNASLLVPYLDALSGTSFTNGANFAVVGSSTLPKYVPFSLNIQVMQFRRFKARSLDLVTAGARNFINDEGFRNALYLIDIGQNDIADSFAKNLSYAQVIKKIPSFITEIENAVKNLHNEGARKFWVHNTGPLGCLPKILALAQKKDLDSLGCLSSYNSAARLFNEALLHLSQKLRSELKDSTLVYVDIYAIKYDLITNAAKYGFSNPLMVCCGFGGPPYNFDVRVTCGQPGYQVCGEGARYVSWDGIHHTEAANTLIASKILSMAYSTPRTPFDFFWRR* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00966 361 SUPERFAMILY SGNH hydrolase 32 345 - -
Lapu6g00966 361 Coils Coil 360 361 - -
Lapu6g00966 361 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 12 344 - -
Lapu6g00966 361 Gene3D SGNH hydrolase 28 349 IPR036514 -
Lapu6g00966 361 CDD SGNH_plant_lipase_like 30 345 IPR035669 -
Lapu6g00966 361 FunFam GDSL esterase/lipase At1g09390 20 348 - -
Lapu6g00966 361 Pfam GDSL-like Lipase/Acylhydrolase 32 343 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00966 Lapu-Chr6 9844892 9849071 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00966 30 350 Acyl Lipid Metabolism Gene Families AT4G10950 26.608 2.20e-29 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00966 - - gmx:100797617 637.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00966 6 9844892 9849071 Lapu6g00966 6 9844892 9849071 ECH