Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00962 ATGGGGTTTCAAAACTTGGCCTTAATTACTTTTATGTTGACATTGTTTATTAGTGAATATGTGAATTGCATTGATATTGTTGAAGCTCACAATCATTCACCCAAAAAATTAGTTTCCCAAAGACCTAATGGTGGTTTCATTAAACGAAATGGCACCCATTTTGTTCTAAATGGGAGGCCATACTACTTCAACGGATTCAATGCCTATTGGTTAATGACTTTTGCAGCCGACCCATCTACAAGTTCTAAGGTCATTGCAACTTTTCAAGAAGCTTCCAAACATGGTTTGAACTTAGCAAGAACCTGGGCATTCAATGACGCCGGTTACAAAGCCCTTCAAACTTCACCTGGTATTTATGACGAGAGTGTTTTTAGGGCATTGGATGTTGTGATATCAGAAGCAGGAAAATATGGGATACGATTGATTCTAAGCCTGGTAAATAATTGGAAAGATGCTGGTGGAAAGAACCAGTATGTTCAATGGGCAAAACAACGTGGTCAGAGAGTAAGCACAGAAGATGACTTCTTCTCTAACCCCATCACTAAGCAATACTACAAAAATCATGTCAAGACTGTGTTGACAAGAAAGAACACAGTGAGTGGAGTAATATATAAGGATGACCCAACCATTTTTGCATGGGAGCTCATGAATGAACCTCGTTCTTTAGACTTATCTGGAAAACAAGTTCAGGATTGGGTGAGGGAGATGGCTGCATATGTGAAGTCCATTGACAGCAATCACTTACTGCAAGTAGGGCTTGAAGGATTTTACGGTGAATCACTGGCGCGAAGAAAACAGTTCAATCCAGGATACGAAGCAGGAACTGATTTCATTTCTAACAACCTTGTTCCTGAAATCGATTTTGCCACCATTCATCTCTACCCTCAATGGATGTCAAGGTATAACGAATCAAGCCAAGATGTGTTCATTGAAAGGTGGGTTGACATGCATATTGAAGATGCAAATAATGTCTTACGAAAACCCATTCTTCTTACGGAGTTTGGGTTGAATTCAAGAATCCCAGGATACACCATTGCCGAAAGGGATAGATTATATGCAAAACTATACAATCGGGTATACTTCAGCGCCAGCCATGGGGGACCATGTGCAGGTGCAGCTTTTTGGCAACTATTTGCCCAAGGAATGGATAACATGCGTGATGGTTATGAAATCATCTTTCAGGAGTCTCCTTCAACTACCAACATCATCTCTCAACAATCTTTAAGGATGTCAAAACTTAGATAG 1245 0.4016 MGFQNLALITFMLTLFISEYVNCIDIVEAHNHSPKKLVSQRPNGGFIKRNGTHFVLNGRPYYFNGFNAYWLMTFAADPSTSSKVIATFQEASKHGLNLARTWAFNDAGYKALQTSPGIYDESVFRALDVVISEAGKYGIRLILSLVNNWKDAGGKNQYVQWAKQRGQRVSTEDDFFSNPITKQYYKNHVKTVLTRKNTVSGVIYKDDPTIFAWELMNEPRSLDLSGKQVQDWVREMAAYVKSIDSNHLLQVGLEGFYGESLARRKQFNPGYEAGTDFISNNLVPEIDFATIHLYPQWMSRYNESSQDVFIERWVDMHIEDANNVLRKPILLTEFGLNSRIPGYTIAERDRLYAKLYNRVYFSASHGGPCAGAAFWQLFAQGMDNMRDGYEIIFQESPSTTNIISQQSLRMSKLR* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00962 414 PANTHER - 9 413 IPR045053 GO:0004553
Lapu6g00962 414 Pfam Cellulase (glycosyl hydrolase family 5) 58 338 IPR001547 GO:0004553|GO:0071704
Lapu6g00962 414 SUPERFAMILY (Trans)glycosidases 45 392 IPR017853 -
Lapu6g00962 414 Gene3D Glycosidases 43 414 - -
Lapu6g00962 414 FunFam Mannan endo-1,4-beta-mannosidase 6 43 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00962 Lapu-Chr6 9813356 9815338 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00962 42 414 Glycoside Hydrolase AT5G66460 55.467 1.67e-153 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00962 K19355 - gmx:100788081 640.958