Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00936 ATGCTGCGTCTGAAGGCGTTTCGGCCTACGAGCGATAAAATAGTTAAGATCCAATTGCATCCGACGCATCCATGGATGGTTACCGCCGATGATTCAGATCGAGTTTCGGTTTGGAACTGGGAGCACCGCCAGGTGGTGTATGAGTTGAAAGCTGGTGGAGTGGACGAGCGGCGTTTGGTCGGCGCCAAGTTGGAGAAGCTGGCCGAGGGAGACACAGAGTCCAAAGGGAAGCCTACTGAAGCCATTCGAGGAGGAAGTGTTAAGCAGGTGAATTTTTATGATGATGATGTGCGCTTTTGGCAACTTTGGCATAATCGTTCTGCGGCTGCTGAGGCTCCAACAGCTGTCCATACTTCAGCGTTTAGCTCTCCTGCCCCATCAACAAAAGGGAGACATTTTCTTGTCATATGTTGTTTAAACAAGGCTATATTTTTGGACTTAGTGACAATGCGTGGCCGTGATGTACCAAAGCAAGAGCTTGATAACAAGTCCCTTCTGTGCATGGAGTTCCTTTATAGAACTGGTGTTGGTGATGGTCCTCTTGTTGCTTTTGGTGCATCAGACGGTGTCATTAGAGTTCTCTCAATGATGACATGGAAGCTTGTGCGAAGGTACACTGGAGGTCATAAGGGATCTATCTCTTGCTTGATGTCCTTCATGGCTGCTTCTGGTGAGGCTCTTCTGGTTTCGGGTGCTAGTGACGGATTGCTCATAATTTGGAGTGCTGATCACGGACAGGATTCACGTGAGCTTGTACCCAAGCTGAGTTTAAAAGCACATGATGGAGGGGTTGTGGCAGTTGAGTTGTCAAGGGTAATGGGAGGTGCTCCTCAGCTAATCACAATTGGTGCAGATAAGACATTAGCCATATGGGACACTGTCTCCTTTAAGGATCTGCGGCGTATAAAGCCAGTTCCCAAATTGGCTTGCCATAGTGTGGCTTCTTGGTGCCATCCTCGAGCTCCAAACCTTGATATTCTAACCTGTGTCAAAGATTCTCACATATGGGCGATCGAACATCCCACTTATTCTGCTCTTACGAGGCCATTATGTGAATTGACCTCAGTTATTCCTCCAAACGCCCTTGCTCCTAATAAGAAATTGAGGGTCTATTGTATGGTTACACACACTTTGCAGCCACATCTTGTTGCTACTGGAACCAACATTGGTGTTATTATCTGTGAGTTTGATGCTAGATCTCTTCCACCTGTAGCTCCTCTACCAACTCCACCAGACAGTAGAGAGCATTCTGCCGTATTTGTAATTGAAAGGGAATTGAAGCTATTAAATTTTCAGTTAAACAACTCTGCAAATCCATCTCTTGGAAATAGCAGCTCGTTGTCAGAAACAGGAAGACCCAAGGGAGACTTTTTTGAACCATTACCCGTCAAGCAGGGGAAAAAGCACATTAGTACTCCTGTTCCACATGATTCATACTCAGTTCTTTCTGTCAGCAGTTCAGGAAAGTATCTAGCAATTGTTTGGCCAGATATTCCTTATTTCTCTGTCTACAAGGTCAGTGATTGGTCAATTGTTGACTCTGGAAGTGCAAGGCTTCTGGCCTGGGATACTTGTCGTGACAGATTTGCTATATTGGAATCAGCATTACCTCCTAGAATTCCTGTAATGCCCAAGGGTAGTTCATCAAAAAGAGCCAAAGAAGCAGCTGCGGCACAAGCAGCAGCTGCTGCCGCTGCTGCTGCTTCTACAGCTTCTGTTCAAGTCCGTATCTTGTTAGATGATGGTACATCAAATATACTAATGAGATCTGTTGGCGCACGCAATGAACCAGTCATTGGTTTGCGTGGAGGAGCACTGCTTGGTGTTGCCTATCGAACATCTAGGAGAGTCAGTCCTATTGCTGCCACAGCTATTTCAACAATCCAGTCTATGCCCTTATCAGGCTATGGAAGCAGCGGTCTTTCTTCTTTTACTACTTATGATGATGGATTTTCTTCAAATAGACCTCCAACCACAGCAGCACCTCAAAACTTCCAGCTATACAGTTGGGAGACATTCCAGCCAGTGGGGGACCTTCTTCCTCAGCCAGAATGGACTGCTTGGGACCAAACCGTTGAGTACTGTGCATTTGCATACCAGCAATACATAGTCATATCTTCTTTGCGCCCTCAATATAGATATTTGGGAGATGTTGCAATCCCATATGCTACCAGTGCTGTTTGGCACAGGAGACAACTGTTTGTGGCTACCCCAACTACTATCGAAATTGTTTTTGTGGATGCTGGGGTTGCTCAAATTGACATTGAAACTAAGAAGATGAAAGAAGAGCAGAAAATGAAAGAAGCACAGGCAAGAGCTGTTGCAGAGCACGGAGAGTTAGCACTAATTACTGTAGAAGGTCCTCAGTCTGCTAAGGAAGAAAGAATAGCAATGAGGCCACCAATGTTGCAGGTCGTTCGGTTGGCTTCATTTCAGCATTCTCCTTCAGTGCCACCTTTCTTAACATTACCGAAACATTCTAGAGTTGATGGTGATGACTCTTGGATGGCTACAGAAGAGAGAAAGGCAGGTGAGGTGGCAGTTGGTGGTGGGGGTGTGTCTGTGGCAGTTACCCGTTTTCCAATGGAGCAGAAACGTCCAGTTGGGCCTCTTGTAGTTGTAGGTGTCAGGGATGGAGTTCTTTGGCTAATTGACAGGTACATGTGTGCTCATGCCTTATCCTTGAGTCATCCTGGTATACGCTGTCGATGCCTTGCTGCTTACGGAGATGCTGTTAGTGCAGTAAAATGGGCAAGTAGACTTGGAAGAGAACACCATGATGATTTAGCACAATTTATGCTAGGAATGGGCTACGCTACTGAAGCACTTCATTTGCCTGGAATATCAAAGAGGTTGGAGTTTGATTTGGCAATGAAGAGCAATGATTTGAAAAGAGCCCTTCATTGTCTTCTTACCATGAGTAACAGCCGGGATATAGGACAAGATGATACTCCTAGTCTTGGTTTGAATGACATCCTTAATTTATCAGATAAAAAACAAGAGAAAATATCAGATAAAAAACAACATATAGTTGAAGGTGTTCAGGGTATAGTGAAGTTCGCGAAAGAGTTCTTGGATCTTATTGACGCTGCAGATGCTACTGCACAGAGTGAAATTGCCCGTGAGGCTCTCAAGAGGTTAGCTGCAGCAGGTTCGGTGAAAGGTGCTTTAGAAGGTCATGAATTGAGAGGGTTAGCATTACGTCTTGCAAATCATGGAGAGTTGACACGACTAAGTGGTTTGGTTAACAACTTAGTCACGCTTGGTTTGGGACGGGAAGCAGCATTTGCTGGTGCTGTTTTGGGTGACAATGCTCTGATGGAGAAAGCATGGCAAGATACTGGAATGCTGGCAGAGGCTGTACTTCATGCTCATGCACATGGACGTCCAACTTTGAAGAACTTAGTTCAGGCTTGGAACCAAGCGCTACAGAGAGAGATTGAACCTACCCCATCTCAGAAGACAGATGCTGCAGCTGCGTTTTTAGCTTCTCTTGAGGAGCCTAAACTCACGAGTTTGGCAGATGCTGGGAAGAAAGCGCCCATTGAAATCCTGCCTCCGGGGATGGTGTCTCTTAATGCTCCTATTTCCATCCAGAAAAAACCAGCTTCTGCTGCACAGAATCCCCAACAACCCCCAGACAAGCCATTGGCACTGGAAGCACCTCCTACGACCACAGCTGCACCAGAGAGTGCTACTCAGAAACCTGAATCCACACCAACATCAGTTAATGAGCCATCTCCGTCAGAGTCTACCTCAGACTCCACACCAGCTCCTGTAGCTGCTCTACCTCAACCAGAATCAGGTGAAACCACAATAGATGATGGGGCTCCTACCACTGGACCAGCTAGTGACGGAGATCCAAATGTTAATGGTGAAACTGGTCAAGCAGAAGCGTCTACTGGCAATCCAGCACCCCCACAGGTGCCCCCACCTCCAGTAGCAGCAGAGATTTTGGAGACTTCCACTCCCAGCACAGCTACACTTCCTACAACAACCACAGTTCCTACAACAACTACAGTTCCTACAACAACTACAGTTCCTACAACAACTACAGTTCCTGCAAATGATCCCTTTATATGA 4083 0.4619 MLRLKAFRPTSDKIVKIQLHPTHPWMVTADDSDRVSVWNWEHRQVVYELKAGGVDERRLVGAKLEKLAEGDTESKGKPTEAIRGGSVKQVNFYDDDVRFWQLWHNRSAAAEAPTAVHTSAFSSPAPSTKGRHFLVICCLNKAIFLDLVTMRGRDVPKQELDNKSLLCMEFLYRTGVGDGPLVAFGASDGVIRVLSMMTWKLVRRYTGGHKGSISCLMSFMAASGEALLVSGASDGLLIIWSADHGQDSRELVPKLSLKAHDGGVVAVELSRVMGGAPQLITIGADKTLAIWDTVSFKDLRRIKPVPKLACHSVASWCHPRAPNLDILTCVKDSHIWAIEHPTYSALTRPLCELTSVIPPNALAPNKKLRVYCMVTHTLQPHLVATGTNIGVIICEFDARSLPPVAPLPTPPDSREHSAVFVIERELKLLNFQLNNSANPSLGNSSSLSETGRPKGDFFEPLPVKQGKKHISTPVPHDSYSVLSVSSSGKYLAIVWPDIPYFSVYKVSDWSIVDSGSARLLAWDTCRDRFAILESALPPRIPVMPKGSSSKRAKEAAAAQAAAAAAAAASTASVQVRILLDDGTSNILMRSVGARNEPVIGLRGGALLGVAYRTSRRVSPIAATAISTIQSMPLSGYGSSGLSSFTTYDDGFSSNRPPTTAAPQNFQLYSWETFQPVGDLLPQPEWTAWDQTVEYCAFAYQQYIVISSLRPQYRYLGDVAIPYATSAVWHRRQLFVATPTTIEIVFVDAGVAQIDIETKKMKEEQKMKEAQARAVAEHGELALITVEGPQSAKEERIAMRPPMLQVVRLASFQHSPSVPPFLTLPKHSRVDGDDSWMATEERKAGEVAVGGGGVSVAVTRFPMEQKRPVGPLVVVGVRDGVLWLIDRYMCAHALSLSHPGIRCRCLAAYGDAVSAVKWASRLGREHHDDLAQFMLGMGYATEALHLPGISKRLEFDLAMKSNDLKRALHCLLTMSNSRDIGQDDTPSLGLNDILNLSDKKQEKISDKKQHIVEGVQGIVKFAKEFLDLIDAADATAQSEIAREALKRLAAAGSVKGALEGHELRGLALRLANHGELTRLSGLVNNLVTLGLGREAAFAGAVLGDNALMEKAWQDTGMLAEAVLHAHAHGRPTLKNLVQAWNQALQREIEPTPSQKTDAAAAFLASLEEPKLTSLADAGKKAPIEILPPGMVSLNAPISIQKKPASAAQNPQQPPDKPLALEAPPTTTAAPESATQKPESTPTSVNEPSPSESTSDSTPAPVAALPQPESGETTIDDGAPTTGPASDGDPNVNGETGQAEASTGNPAPPQVPPPPVAAEILETSTPSTATLPTTTTVPTTTTVPTTTTVPTTTTVPANDPFI* 1361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00936 1360 PANTHER TSET COMPLEX MEMBER TSTF 1 1256 - -
Lapu6g00936 1360 SUPERFAMILY WD40 repeat-like 7 509 IPR036322 GO:0005515
Lapu6g00936 1360 SMART WD40_4 250 292 IPR001680 GO:0005515
Lapu6g00936 1360 SMART WD40_4 1 39 IPR001680 GO:0005515
Lapu6g00936 1360 SMART WD40_4 198 241 IPR001680 GO:0005515
Lapu6g00936 1360 MobiDBLite consensus disorder prediction 1272 1303 - -
Lapu6g00936 1360 MobiDBLite consensus disorder prediction 1200 1360 - -
Lapu6g00936 1360 Gene3D - 3 352 IPR015943 GO:0005515
Lapu6g00936 1360 MobiDBLite consensus disorder prediction 1226 1259 - -
Lapu6g00936 1360 ProSiteProfiles Trp-Asp (WD) repeats profile. 257 301 IPR001680 GO:0005515
Lapu6g00936 1360 Gene3D - 903 1160 - -
Lapu6g00936 1360 Coils Coil 752 772 - -
Lapu6g00936 1360 SUPERFAMILY Putative isomerase YbhE 9 143 - -
Lapu6g00936 1360 MobiDBLite consensus disorder prediction 1319 1360 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00936 - - gmx:100786844 2336.61