Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00907 ATGGTTTTAAGACAGCCAGAAGCATCACCATCAGAATATGCAAGAGCTAACAAGGAGCTACGGAAGCTAAGTGGCTCTGTCGACCTCATTAATGAACTGAGGACCAAACAGAAGGAAATTGATGGCTTGAAGTCACTAATCACTGAATGTTCTGAGGATAAAGACATGCTTAATATGGCTACAGAGGAAATGGGTCAGGCCATAGAAGAAGAAAGAAGACTGCAAAATTTGCTGCTGAAGTCATTACTTCCTAAGGATGATGCTGATGAAAGGGATTGCATTTTGGAGGTGCGAGCAGGCACTGGTGGGGAGGAGGCTTCCCTGTTTGCGATGGACATCTTTAGAATGTATGAGAAGTATGCTCTCAAGAAAGGTTGGAAATTTGAAGTAGTAGATATAGCTGAATCTGATCTTAAAGGGTACAAGGAGGCTAGTGCAGCAATTGCAGGAGTTGGTGTTTTTGGGAAACTAAAATTTGAAAGTGGAATCCATCGAGTCCAGGTTTTACGAGTTCCTGTGACAGAAAAGTCAGGACGTATTCATACCAGTGCTGTTTCTGTTGCAATTCTTCCTCAGGCTGATGAGGTGGATGTTCAATTGAAAAATGAAGACTTAAGAATCGACACATATAGATCTGGTGGTTCAGGTGGCCAGCATGCAAATACAACCAACAGTGCTGTTAGAGTAATCCACATTCCAACAGGGATTATGATTGCTATACAAGATGAGCGGTCTCAACATATGAACAAGGCCAAAGCTCTCAAGGTACTCTGTGCAAAACTATATGAAATGGAAAGGCTAAGGCTTCATAGAAGTCGATCAAAGCTTCGATCCGAGCAGATTGGTAGTGGGGATAGATCTGAACGCATCAGAACATACAATTTTCCTCAGGGCCGGGTAACTGATCATAGAGTTGGTATCACTTATCACTCGGTAGATGATGTGATGCAAGGTGAAAATCTTGATGTCTTCATTGATGCCCTTCTATTGCAAGAAGAAATGGATGCAATTGCAACTTTTAGTTCATCTGAGTAA 1035 0.4203 MVLRQPEASPSEYARANKELRKLSGSVDLINELRTKQKEIDGLKSLITECSEDKDMLNMATEEMGQAIEEERRLQNLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAMDIFRMYEKYALKKGWKFEVVDIAESDLKGYKEASAAIAGVGVFGKLKFESGIHRVQVLRVPVTEKSGRIHTSAVSVAILPQADEVDVQLKNEDLRIDTYRSGGSGGQHANTTNSAVRVIHIPTGIMIAIQDERSQHMNKAKALKVLCAKLYEMERLRLHRSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITYHSVDDVMQGENLDVFIDALLLQEEMDAIATFSSSE* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00907 344 SMART PCRF_a_2 45 160 IPR005139 GO:0006415
Lapu6g00907 344 SUPERFAMILY Release factor 10 332 IPR045853 -
Lapu6g00907 344 NCBIfam peptide chain release factor 1 10 341 IPR004373 GO:0006415|GO:0016149
Lapu6g00907 344 FunFam Peptide chain release factor 1 89 201 - -
Lapu6g00907 344 Coils Coil 57 77 - -
Lapu6g00907 344 PANTHER LD18447P 5 341 - -
Lapu6g00907 344 Pfam RF-1 domain 194 304 IPR000352 GO:0003747|GO:0006415
Lapu6g00907 344 Gene3D - 193 288 - -
Lapu6g00907 344 FunFam Peptide chain release factor 1 193 288 - -
Lapu6g00907 344 Gene3D - 95 325 - -
Lapu6g00907 344 Pfam PCRF domain 9 187 IPR005139 GO:0006415
Lapu6g00907 344 Gene3D - 2 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00907 Lapu-Chr6 9254048 9259087 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00907 K02835 - gmx:100800412 594.349