Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00899 ATGGATTCGGCGAAAGAAGCAATGCCGGTGAAAGACCAACACCTAACGGAATGGCGCATGCATCGAGGTCCCTACCTCGGAGACATTTCAGCTCTGTGTTTTCTCCACCTTCCAAATCTCTCTCTTCCTTTTCTGCTCGCAGGTTTGGGTTCTGAAATTGCGGTCTATGATTTGAAACTGAGCAAGAGAATAAGGTCCTTCTCCGTATTCGAAGGAGTTCGTGTCCACGGAATCGCTTCTAGTTTCCCTCGCGAGACCATGATTGCTGTGTTTGGGGAAACGAGAGTGAAGCTGTTTAGCTTCGAATTTGATGGCGTTTCGGGGAGCGCAGAGTTGACGCTAGTTCATTTGTTGCCGAAGTTCGGTCACTGGGTTTTGGATGTTTGCTTCCTGGAGGGATGCTTAGCTCATTCCAATGTGGAGGGTCATTTTCTTGCTGTAGGATGTAGTGATAATTCAGTTCATGTTTGGGACATTTCTAACTTCATTGCGGTTCTTAAGGTTCAATCTCCAGTACGGTGCCTTCTGTACTCGATGCGATTATGGGGTCACAATCTTGAAGTTCTCCGAATTGCTTCTGGTACAATATTTAATGAGATTATTGTTTGGAAAGTGACCCATCAACACAATAAATCTTCAAGTCATCAAGAAAACCATGATCATCAGAGCATTTCATCTTCTGTTTGCTGCCAGCTAAAGGATAAACTGTTTGAGGCAACTCATGTATGTAAACTTATTGGACATGAAGGTTCAATCTTCCGAATAGCATGGTCGTCTTGTGGATCTAAGCTGGTATCTGTGTCTGATGACCGGAGTGCACGTGTCTGGGCTGTTTCTATTGAAAGGGAACATGCATTCTGCCACAATCCCATTGCCCTTGTCTTATTTGGGCATAATGCTCGGGTTTGGGACTGCTCTATATCTGATAATTTGATTGTCACTGCTAGTGAGGATTGTACATGTCGTATTTGGGGAGTTGACGGTAAACAACTGCAAGTCATTAAGGAGCACATTGGAAGAGGTATATGGAGATGTTTGTATGACCCAAATTCATCGCTGCTTATAACTGCTGGGTTTGACTCTGCTATTAAAGTACATCGACCTCGTGCATCTCTTCCCATGTGCTTGGAAGCTGTAGAAGGGTCCCCTAGTAAAACAGAGTTGTTTTCGATTTGCATCCCTAATGTGTCAGAGCATATTGGATTTATGGACAGCAAGAGTGAATATGTTCGATGTTTACGCTTTTCCTGTCAGGATTCTCTTTACGTTGCTACCAATCATGGTTATCTCTACTATGCTAAATTATGCGATACTGGAGCTGCTCAGTGGAATCAACTTGTCCAGGTCAGCAATGGGGCACCAATTATCTGTATGGATTTATTGTCCAAGGACTCTGTTGAACATGACTGTGGTTCTGAGGATTGGATTGCTATTGGAGATGGTAAAGGAAATATGACAATTATTGAAGTTGCCAAGGATGATTGCACTCCTATAGTGAGATTGTGCTTTACTTGGCCAGCTGAAACTGAGAGACAGCTCTTGGGTACTTATTGGTGCAAATCTCTGGGATGTAGGTATGTCTTCACAGCTGATCCTAGAGGAACATTGAAACTCTGGAGATTGCCCGATCCTTCACAATCTGATCTTCAGAGCTCCATGGGGAGTAACACATTATCACATATAGCGGAGTTCATGTCAAATTTTGGAATGCGCATAATGTGTTTGGATGCATGCATGGAGGAAGAGGTCCTAGCATGTGGAGATGTACGGGGTAATATGGTTCTGTTCCCTTTGCTAAAGAATCTAGTCCTGAGCATACCTGATGCAGAAGAAAGGAAGATACTTCCAGTAAATAATTTCAAAGGAGTTCATGGGATTTCAAGTGTGTCCAGTGTTTCTGTGACTAAGCTTGGTTATAATCAGATAGAGATACGCTCAACTGGAGCAGATGGTTGTATATGCTATCTGGAATATGATAAAGAAATGCATAATTTGCAATTTACGGGTATGAAACAAGTGAAGGAATTGTCTTTGATTGAGTATGTTTCTGTGGATAACAAGCCCGGTGATAGATTGTCAAGCAGCTATGCAGCTGGTTTTGCATCTGTGGATTTTATAGTATGGAACCTGGTGAATGAGAATAAGGTGGTGAACATTCCATGTGGTGGATGGCGACGTCCTCATTCCTATTATCTAGGTGATATACCAGAGATGAAGAACTGTTTTGCCTTTGTCAAGGATGAATTGATACATATACATAGACACTGGATTCATAATAGAGATGGGAAGGTATACCCTCAAAATTTGCACATGCAGTTCCATGGTAGAGAGATACATTCCTTGTGCTTTATCTCTGATGATGTGCTTGTTGGAGATAATTTCAAGAGCACTTTATTTTCTAAATCAAGTTGGATTGCAACTGGATGTGAGGATGGAACTGTGAGGTTGACTTGGTACTCTCCAGGCACTGAAAATTGGGCCATGTCAAAACTGCTTGGAGAACATGTTGGGGGATCGGCGGTGAGATCAATTTGTTGTGTGTCAAAAGTACACACAGTTTCATCAGATATGGGTGATGTGCCTGATGGGAGGATTGAACTAAATGCTGCTGTTGAGAACAAAGATAATCCAACATTATTGATATCGGTGGGTGCAAAGCGTGTCTTAACTTCTTGGATATTAAAAAATAGGATGCTGGACATCAAAAATGACTTCCTAATGAATCATCAATACAAATCAGAAGGAGTTGATGACTGTCTTTTGTCCTCATCAATGACGTTCCAGTGGCTTTCCACTGATATGCCAGCCAAATATTCAATTACACATGATACTCCCAAAAATAAGGTGGAAAAGATAGTTGGTGTTGCTGAAAATGTTTCTCATACAAATAATGATGCTAGAATGATTTCTGAGAGTGGAATGGCAAACTTGATCAGAGATAAACATGAAGATGACTGGAGATATCTTGCAGTCACTGCTTTTCTTGTTAGATGTTCTGGTTCCAGGATATCTGTCTGTTTTGTTGTTGTTGCATGTTCAGATGCTACACTTATGTTACGGGCTTTAATATTACCCTTTCGCTTGTGGTTTGACGTAGCTTTACTGGTTCCTTTACTGGCACCAGTTTTGTCATTGCAGCATATCATATATCCCATGTGTAGGCCTTGTAAAGAAAATATCCAAGCTGGAAATGTTTATATTGTGATTAGCGGGTCTACTGATGGCAGTGTTGCTTTCTGGGACCTAACTGACAGTGTTGAAGCTTTTATGCAGCGGGTTTCAGTTTGTAATGTTGAAAAGCTTTTTGATTGTCAAAAACGACCACGCACAGGGAGAGGAAGTCAGGGTGGTAGACAGTGGAGATCCTTAAGCAGAGACTTGTCAAAGAAAAGACAAGACAGCAGTCTGGTCACTTTGAAAGCCAAAGAGAAGACCAATAGCATCAGCTATGCTACACAGGAGACCCCTTACGTGCCAAGTGATTCTGAAGACAGCAAGATGGGTTGTTCACAATCCACACATCTGGCTCCCCCGGAGTTAGAAAGCAAGACTGATAATTCCTCGATGGAAATATGTGAAATACAGCCTCTATGCCTTTTGAAAACGATTCACCAATCTGGTGTCAACTGTCTCCATGTTTCAGAGATAAAGAGTGGGCAAAATACTGACGGTTGTCAAATGTACAGCATAGTTAGTGGCGGTGATGATCAAGCACTTAATCATCTAATGGTTGAATTATCACCTAAATCAATAAATTTAAGTGATAGGATTTTGAGCCCCGAGATCACTCATATTGTCTCTGTGCCTGAATATGGAAAGATCTTCAATTTTCAAAATCGGAGCAAGAAGTATAAGATTAGATTCTTAAATAACGAAAAATTACCCTCTGCCCACAGCTCTTCTGTCAAAGGTGTCTGGACAGACGGATCTTGGGTGTTTTCCACTGGACTTGATCAGCGGGTCAGATGCTGGCATCTTCAGCAGAGCAAACTAATAGAGCATTCATATCTAATAGTTAGTGTTCCAGAGCCAGAAGCGTTATCTGCTAGGGCTTGTGGCAGGAACCAATATCAAATTGCTGTTGCTGGAAGAGGGATGCAAGTAATTGATTTTTCTGAATCTTGA 4125 0.4175 MDSAKEAMPVKDQHLTEWRMHRGPYLGDISALCFLHLPNLSLPFLLAGLGSEIAVYDLKLSKRIRSFSVFEGVRVHGIASSFPRETMIAVFGETRVKLFSFEFDGVSGSAELTLVHLLPKFGHWVLDVCFLEGCLAHSNVEGHFLAVGCSDNSVHVWDISNFIAVLKVQSPVRCLLYSMRLWGHNLEVLRIASGTIFNEIIVWKVTHQHNKSSSHQENHDHQSISSSVCCQLKDKLFEATHVCKLIGHEGSIFRIAWSSCGSKLVSVSDDRSARVWAVSIEREHAFCHNPIALVLFGHNARVWDCSISDNLIVTASEDCTCRIWGVDGKQLQVIKEHIGRGIWRCLYDPNSSLLITAGFDSAIKVHRPRASLPMCLEAVEGSPSKTELFSICIPNVSEHIGFMDSKSEYVRCLRFSCQDSLYVATNHGYLYYAKLCDTGAAQWNQLVQVSNGAPIICMDLLSKDSVEHDCGSEDWIAIGDGKGNMTIIEVAKDDCTPIVRLCFTWPAETERQLLGTYWCKSLGCRYVFTADPRGTLKLWRLPDPSQSDLQSSMGSNTLSHIAEFMSNFGMRIMCLDACMEEEVLACGDVRGNMVLFPLLKNLVLSIPDAEERKILPVNNFKGVHGISSVSSVSVTKLGYNQIEIRSTGADGCICYLEYDKEMHNLQFTGMKQVKELSLIEYVSVDNKPGDRLSSSYAAGFASVDFIVWNLVNENKVVNIPCGGWRRPHSYYLGDIPEMKNCFAFVKDELIHIHRHWIHNRDGKVYPQNLHMQFHGREIHSLCFISDDVLVGDNFKSTLFSKSSWIATGCEDGTVRLTWYSPGTENWAMSKLLGEHVGGSAVRSICCVSKVHTVSSDMGDVPDGRIELNAAVENKDNPTLLISVGAKRVLTSWILKNRMLDIKNDFLMNHQYKSEGVDDCLLSSSMTFQWLSTDMPAKYSITHDTPKNKVEKIVGVAENVSHTNNDARMISESGMANLIRDKHEDDWRYLAVTAFLVRCSGSRISVCFVVVACSDATLMLRALILPFRLWFDVALLVPLLAPVLSLQHIIYPMCRPCKENIQAGNVYIVISGSTDGSVAFWDLTDSVEAFMQRVSVCNVEKLFDCQKRPRTGRGSQGGRQWRSLSRDLSKKRQDSSLVTLKAKEKTNSISYATQETPYVPSDSEDSKMGCSQSTHLAPPELESKTDNSSMEICEIQPLCLLKTIHQSGVNCLHVSEIKSGQNTDGCQMYSIVSGGDDQALNHLMVELSPKSINLSDRILSPEITHIVSVPEYGKIFNFQNRSKKYKIRFLNNEKLPSAHSSSVKGVWTDGSWVFSTGLDQRVRCWHLQQSKLIEHSYLIVSVPEPEALSARACGRNQYQIAVAGRGMQVIDFSES* 1375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00899 1374 Gene3D - 290 511 IPR015943 GO:0005515
Lapu6g00899 1374 ProSiteProfiles Trp-Asp (WD) repeats profile. 245 276 IPR001680 GO:0005515
Lapu6g00899 1374 Gene3D - 1041 1368 IPR015943 GO:0005515
Lapu6g00899 1374 SUPERFAMILY WD40 repeat-like 134 541 IPR036322 GO:0005515
Lapu6g00899 1374 ProSiteProfiles Trp-Asp (WD) repeats profile. 295 324 IPR001680 GO:0005515
Lapu6g00899 1374 ProSiteProfiles Trp-Asp (WD) repeats profile. 1068 1090 IPR001680 GO:0005515
Lapu6g00899 1374 PANTHER WD REPEAT PROTEIN 22 1373 - -
Lapu6g00899 1374 Pfam WD domain, G-beta repeat 296 324 IPR001680 GO:0005515
Lapu6g00899 1374 Pfam WD domain, G-beta repeat 122 158 IPR001680 GO:0005515
Lapu6g00899 1374 Pfam WD domain, G-beta repeat 242 276 IPR001680 GO:0005515
Lapu6g00899 1374 MobiDBLite consensus disorder prediction 1150 1182 - -
Lapu6g00899 1374 SMART WD40_4 1042 1081 IPR001680 GO:0005515
Lapu6g00899 1374 SMART WD40_4 327 367 IPR001680 GO:0005515
Lapu6g00899 1374 SMART WD40_4 1193 1243 IPR001680 GO:0005515
Lapu6g00899 1374 SMART WD40_4 288 325 IPR001680 GO:0005515
Lapu6g00899 1374 SMART WD40_4 111 158 IPR001680 GO:0005515
Lapu6g00899 1374 SMART WD40_4 1282 1325 IPR001680 GO:0005515
Lapu6g00899 1374 SMART WD40_4 765 818 IPR001680 GO:0005515
Lapu6g00899 1374 SMART WD40_4 498 540 IPR001680 GO:0005515
Lapu6g00899 1374 SMART WD40_4 238 277 IPR001680 GO:0005515
Lapu6g00899 1374 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 245 276 - -
Lapu6g00899 1374 Gene3D - 512 896 IPR015943 GO:0005515
Lapu6g00899 1374 Gene3D - 2 234 IPR015943 GO:0005515
Lapu6g00899 1374 Gene3D - 235 289 IPR015943 GO:0005515
Lapu6g00899 1374 SUPERFAMILY WD40 repeat-like 470 1331 IPR036322 GO:0005515
Lapu6g00899 1374 MobiDBLite consensus disorder prediction 1107 1131 - -
Lapu6g00899 1374 SUPERFAMILY WD40 repeat-like 28 209 IPR036322 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00899 K24737 - gmx:100780968 2375.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00899 6 9187074 9200367 Lapu6g00899 6 9187074 9200367 ECH