Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00882 ATGGCCATGGCAGCTCCAACTCTGACCCCGATTCCTTCCGTAACAACCTTGAATAATCAAATCCATGGCCTTCAACTGAAATTCTCAGTTTTCACTTTCAACCCTCCGAGCCAAAGTAGAAGAAGGACCGTTGGAATCCGATTATCATCTTCCCCCAATCACAACCAGAATCAGTCTTCTCCCGGATTATACTCCGCCAAGAAATTCGAGCTCACCGCATCCAACGTCGACCTCGTTCTCGAAGATGTTCGCCCTTACCTCATCGCAGACGGTGGCAACGTCGACGTGGTCTCCGTGGAAGACGGCGTCGTATCTCTCCGTCTTCAAGGAGCGTGCGAGAGCTGCCCGAGCTCCACCACAACCATGACGATGGGGATCGAGCGCGTTCTTAAGGAAAAATTCGGCGACGCCGTCAAGGACATTCGCCAAGTCTACGATAACCAACCCAAGGAGACAACCGTTGAGGCCGTGAATAGTCATCTTGATATATTGAGAGCAGCCATAAAGAATTACGGAGGCAGCGTGGAAGTGTTATCCGTTGAAGGTGAGGAGTGCCAAGTTAGGTATGTTGGACCAGACTCCATTGGATCCGGAATCAAAGCAGCCATCAAGGAGAGGTTTCCAGACATTCTCAATGTTACCTTCTCTGCCTAG 654 0.5061 MAMAAPTLTPIPSVTTLNNQIHGLQLKFSVFTFNPPSQSRRRTVGIRLSSSPNHNQNQSSPGLYSAKKFELTASNVDLVLEDVRPYLIADGGNVDVVSVEDGVVSLRLQGACESCPSSTTTMTMGIERVLKEKFGDAVKDIRQVYDNQPKETTVEAVNSHLDILRAAIKNYGGSVEVLSVEGEECQVRYVGPDSIGSGIKAAIKERFPDILNVTFSA* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00882 217 Gene3D - 154 215 IPR034904 -
Lapu6g00882 217 FunFam NifU-like protein 3, chloroplastic 68 151 - -
Lapu6g00882 217 Pfam NifU-like domain 77 136 IPR001075 GO:0005506|GO:0016226|GO:0051536
Lapu6g00882 217 PANTHER IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED 65 214 - -
Lapu6g00882 217 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 151 214 IPR034904 -
Lapu6g00882 217 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 74 146 IPR034904 -
Lapu6g00882 217 Gene3D - 68 153 IPR034904 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00882 Lapu-Chr6 9033927 9035509 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00882 K22074 - gmx:100527356 281.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00882 6 9033927 9035509 Lapu6g00882 6 9033927 9035509 ECH