LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu6g00879	ATGGCAAATAGACCGGATCCAGATATTGATGATGACTTTCGTGAGCTTTATAAGGAGTACACTGGTCCCCCAGGGTCTGCTACTACGAACAACCAAGAGAGGGCAAAACCAAGTAAGAGATCTAACGCAGGGTCCGATGAGGAGGATGAAGCTCGGGACCCTAATGCTGTTCCAACGGATTTCACCAGCCGAGAAGCTAAGGTTTGGGAGGCTAAGTCAAAGGCTACTGAAAGGAATTGGAAGAAAAGGAAAGAGGAGGAAATGATATGCAAGCTTTGTGGAGAATCAGGACATTTCACTCAGGGCTGCCCATCTACCCTTGGAGCAAATCGCAAGTCTCAAGATTTCTTTGAAAGGATACCTGCCAGAGACAAGAATGTACGGGCACTTTTCACAGAGAAAGTTTTAAGCAAGATTGAAAGGGATATTGGGTGCAAAATTAAGATGGATGAAAAGTTTATTATCGTCAGTGGTAAGGATAGATTAGTTATGGCGAAAGGTGTTGATGCGGTACACAAGATTCGAGAGGAAGGTGATCAAAGGGGATCATCTAGTTCTCAAATGACCCGATCAAGATCACCTGAGAGAAGTCCAGTTAATGCTCGGTTTCAACGCCCTGAGCCCCAAAGGTCTCATTCTGGACCACGTAACACATCTCAATTTCAACAAAGGTTTGGTAGGCAGGAGAGGGCTGTTGAAGATCGAATCCGGGAGGATGTTCAAAAGTTTGCTAGAGGTTCTCCACAAGCAAGAGGTAAGTTCTTAGCCTTCAAGCATTATCTCCGTCCTGAAGGGTTTCCTCCATTACGAACATATTTACTGAAAGGATTGGCTCCCATGGTTTCATGCTTAACATACTCTTCATTTCATGAAGCTTATGGAAATAGTGGAGCTAGAGGTCGTTCAAGCCGGTCAAGATCTCCAAGACATGCCCCTTTTACGGGAAACTCCTTTAGTTCTTTTGATGGTCGTAATCAAAACATGGGTGCTTATAGGAACGATGGGTGGGATTCTCATAGAAGAGAATCTGGTATCCAGCCTGGTCATCAGTTTGATTACAATGCCTCCCCACAGACTTTGGAAGAATTAGAGTTGGAGTATAAGAACGAGGCAGCAGAGCTAATAAAAATCCGTGACAGAGAAGAAGATGAAGAAAATTTCAAGCATCGGGAGGCTATTAGAGATTTGAGGGAGAAGTACATGAGCAAAGTTGGCTTGGTAAGAGCTACACATGCGAAACAGTGGGAGGATTTTCTTCAGCATGATGCGCAGAGGCGTCAACATCAGCAGGCAGTTCAACAGATGTCTTCAGGTTATCGAGGTTTTAAACAACAGAGCTTTCCTGAATATGATGGCTCCTCTGTCAATCCTCCTCCCTATGCTGGGAACAATTTACCATTGGATTCGAGGAATAGGTTCTCAGACAACATGGAAACTTATACTACCAGGCCTCATGATAATTTTGGTGAATTTCATAGGCGTGGAGATTTTGCAAAAGCTTACAACAGATATTAA	1515	0.4389	MANRPDPDIDDDFRELYKEYTGPPGSATTNNQERAKPSKRSNAGSDEEDEARDPNAVPTDFTSREAKVWEAKSKATERNWKKRKEEEMICKLCGESGHFTQGCPSTLGANRKSQDFFERIPARDKNVRALFTEKVLSKIERDIGCKIKMDEKFIIVSGKDRLVMAKGVDAVHKIREEGDQRGSSSSQMTRSRSPERSPVNARFQRPEPQRSHSGPRNTSQFQQRFGRQERAVEDRIREDVQKFARGSPQARGKFLAFKHYLRPEGFPPLRTYLLKGLAPMVSCLTYSSFHEAYGNSGARGRSSRSRSPRHAPFTGNSFSSFDGRNQNMGAYRNDGWDSHRRESGIQPGHQFDYNASPQTLEELELEYKNEAAELIKIRDREEDEENFKHREAIRDLREKYMSKVGLVRATHAKQWEDFLQHDAQRRQHQQAVQQMSSGYRGFKQQSFPEYDGSSVNPPPYAGNNLPLDSRNRFSDNMETYTTRPHDNFGEFHRRGDFAKAYNRY*	505

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu6g00879	504	MobiDBLite	consensus disorder prediction	23	38	-	-
	Lapu6g00879	504	MobiDBLite	consensus disorder prediction	39	55	-	-
	Lapu6g00879	504	SUPERFAMILY	Retrovirus zinc finger-like domains	77	109	IPR036875	GO:0003676\|GO:0008270
	Lapu6g00879	504	MobiDBLite	consensus disorder prediction	181	226	-	-
	Lapu6g00879	504	MobiDBLite	consensus disorder prediction	294	330	-	-
	Lapu6g00879	504	PANTHER	OS01G0252900 PROTEIN	1	504	-	-
	Lapu6g00879	504	MobiDBLite	consensus disorder prediction	174	232	-	-
	Lapu6g00879	504	MobiDBLite	consensus disorder prediction	1	18	-	-
	Lapu6g00879	504	Coils	Coil	360	380	-	-
	Lapu6g00879	504	MobiDBLite	consensus disorder prediction	1	78	-	-
	Lapu6g00879	504	MobiDBLite	consensus disorder prediction	294	327	-	-
	Lapu6g00879	504	ProSiteProfiles	Zinc finger CCHC-type profile.	90	105	IPR001878	GO:0003676\|GO:0008270

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu6g00879	-		-	gmx:100806099	825.854

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lapu6g00879	6	9011563	9016144	Lapu6g00879	6	9011563	9016144	ECH