Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00856 ATGGGAAACCACATAGCCAGAGATCATGGCACCGGCAAAATCGTTTACTGGGATGGTTCCGTTCAAGAGTTTGACGAACCCCTAACGGTGGCAGAGCTCATGATGGAGCACCCACAACAGGTCGTGCTTGATTTTCAATCCGCTGTGAAGCAGAAAAGGCCAACGCCACTGCCCGCAGACAAAAAGCTAGAGATGAAGAAAACCTATGTCATGGTTCCGGTGAAGCGAGGGAAGCCTGTGGGGTTGAGCACCGAGGATAGTCGCCGCATTCTCTTCATCGTTAACTCTCCTCTGCATTCCAAGTATTTTGTTTCTTCTTCAGGCTTTCTTCCTTGGCTTGCAGGGCTGTTCCACACTGTGGGAGAGGTTCCGGTGTTGCACAAAAAGGAAGATGTGGAGAACACCGAAGACAACTACGGTTTTTCTGAGTTTTTGCCAGAAATGATAGAAGGGAGACCAGAGTATTTGAGTCGGCAGTTGTCGGGGAAAGGTTGGAAGCCTAGTTTGGACACCATTAAAGAGAAGAAGGTTAACACAAAACTATCTGGATGGTTATTGTTCCTCAAAACCTTTAATGCTGCAAAGATTTAG 591 0.4738 MGNHIARDHGTGKIVYWDGSVQEFDEPLTVAELMMEHPQQVVLDFQSAVKQKRPTPLPADKKLEMKKTYVMVPVKRGKPVGLSTEDSRRILFIVNSPLHSKYFVSSSGFLPWLAGLFHTVGEVPVLHKKEDVENTEDNYGFSEFLPEMIEGRPEYLSRQLSGKGWKPSLDTIKEKKVNTKLSGWLLFLKTFNAAKI* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00856 196 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 9 174 - -
Lapu6g00856 196 Pfam PADRE domain 1 174 IPR025322 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00856 Lapu-Chr6 8770409 8771428 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00856 - - gmx:100527719 323.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00856 6 8770409 8771428 Lapu6g00856 6 8770409 8771428 ECH
Lapu6g00856 6 8770409 8771428 Lapu7g00564 7 6391892 6392890 PCT