Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00853 ATGGATGCTCTGTGTTTACACAGTAGCATCTGTGGGATAGCTCCATTGACCATTCCCATTACTGCAACTGCACGCGCCAATGATTACGCGTCGCAGTCTCAGGTCAGCGCGGTGGGGCGCTCCTCCTTGTTTTCCAGATTTTCTTTTAAATACCCTTTGACGTCTTTATGGCCACAACAACCCACGGGGAATGCCGGCGGCTACAATGGTCTCGCCGTCGACGACGCCGTTTTGGCGGAGAATGAAACGGAAGAAGGAGAGGGACAAAATGGGAATTGGGTTTTCAAAGTTTTCCATGCAAGGGCTGTTTGGAGCAGGGAAGAGAGGAACGATGATAACAATAACGACAAACTTGTTGCAAATGATCTAACGGATGAAGAAGAGGAGGTGGAAGAGTGTGATGGCTGTAGGGTTGATTATGATGTCGACGAAGACGAAGACACCGAAGACAAAGAAGAAGAAACTGAAGAGGTTTTGTTCGATAAAGACTCGTTTTCGAGAATGCTTCGGCGGGTGTCATTGCCCGAAGCTAGATTATATGCTCGCATATCCCACTTGGGCAATTTGGCATACTCTATCCCCAAAATCAAACCAGGGAACCTCTTCAAAAACCATGGTCTGCGTTTTGTAACTTCATCCATAGAGAAAAAGAAATTGGCTGTGGCAGCAGAAAAAAACCATACATCGGCTGCAATTCATAAAGAAGAAACTAACGTGAAGGATGTGGGTGAAACAGAAGAGAAAAAGAACGGTGGATACATGATGAGTTCATGTACTGCATACAAGATTGCTGCTTCTGCTGCCTCTTATCTCCATACTCAAACAAAGAGCATACTTCCATTCACATCTTCTAATGCTGTGGAAGGTGAAGGTTCGCATGAAGCAAACAATGAAAGCTTTAACGGTGATAAGATGACAAACTCGGAGGAGGCAGCTCTAAAGGCAACTACTGATTCGGTAACAGCAGTTGTTGCTGCAAATGAGGATGTAAAACAGGCCTTTGCAGAGGATTTGAGCTCAACAAGCTCTTCACCCTGTGAATGGTTCGTATGCGACGATGACGAGACTTCTACAAGATATTTTGTGATCCAGGGCTCCGAGTCATTTGCATCCTGGCAAGCGAACCTGCTATTCGAGCCAGTTAAATTTGAGGGGTTAGATGTCCATGTACATAGAGGTATATATGAGGCCGCAAAAGGGACATATCAACAGATGTTGCCAGAAATTCGTGCTCACCTAAAATCTCATGATTCCCGTGCAACTTTCCGTTTCACTGGTCATTCTCTTGGGGGGAGCCTGGCATTACTTGTAAACCTTATGCTGCTAATAAGAAAGGAAGCACCATTGTCCTCTCTGCTTCCTGTCATAACATTTGGCGCCCCATGCATCATGTGTGGAGGTGATAGTCTTCTTGACAAGCTAGGGTTGCCACGGAGTCATGTTCAAGCAATCACAATGCACAGAGACATTGTACCTCGAGCATTTTCTTGCAAGTACCCTAACCATATTGCAGAACTGCTAAAGGCTGTTAATGGTAACTTCCGCAATCATCCATGCCTTAATAACCAGAAGCTATTGTACGCACCAATGGGTGAACTCTTGATCCTACAGCCCGATGAGAATTTTTCACCAAGTCATCATCTTCTGCCTTCAGGCAGTGGTCTATATCTTTTGAGTGGTCCGTTGTCAGAATCTAGTGACACGTTAAAACAGATCCACGCAGCGAAAATGGTGTTCTTGAACTCACCACACCCACTTGAGATATTAAGTGAGCGATCTGCCTATGGATCTGGAGGAACAATTCAGAGAGATCACGACATGAATTCGTACTTGAAATGTGTGAGAACCGTGATTCGGCAAGAACTTAACCAGATTCGGAAGGCAAGGAGAGAGCAAAGGCGAAAGGTGTGGTGGCCTCTGGTGCTGCCTCGTGGAAGCGAGAGTGGCACAGATAAGGGGTCCATGATGTCGGTGAATATGATTCACGAGCAACCTTCCTTCTTTGGCATCATTCACACTGGGAGCGAGTCACTGAAAAGGTTCAGTAGGCTTGTTGCATCCCAACACATGCAATTGTTTGTAGTGCTATTGTTTCCTGCACGGTTGTTACTGGTGGAAGCATGTAACTTAATTAGCTTCAGATGA 2145 0.4559 MDALCLHSSICGIAPLTIPITATARANDYASQSQVSAVGRSSLFSRFSFKYPLTSLWPQQPTGNAGGYNGLAVDDAVLAENETEEGEGQNGNWVFKVFHARAVWSREERNDDNNNDKLVANDLTDEEEEVEECDGCRVDYDVDEDEDTEDKEEETEEVLFDKDSFSRMLRRVSLPEARLYARISHLGNLAYSIPKIKPGNLFKNHGLRFVTSSIEKKKLAVAAEKNHTSAAIHKEETNVKDVGETEEKKNGGYMMSSCTAYKIAASAASYLHTQTKSILPFTSSNAVEGEGSHEANNESFNGDKMTNSEEAALKATTDSVTAVVAANEDVKQAFAEDLSSTSSSPCEWFVCDDDETSTRYFVIQGSESFASWQANLLFEPVKFEGLDVHVHRGIYEAAKGTYQQMLPEIRAHLKSHDSRATFRFTGHSLGGSLALLVNLMLLIRKEAPLSSLLPVITFGAPCIMCGGDSLLDKLGLPRSHVQAITMHRDIVPRAFSCKYPNHIAELLKAVNGNFRNHPCLNNQKLLYAPMGELLILQPDENFSPSHHLLPSGSGLYLLSGPLSESSDTLKQIHAAKMVFLNSPHPLEILSERSAYGSGGTIQRDHDMNSYLKCVRTVIRQELNQIRKARREQRRKVWWPLVLPRGSESGTDKGSMMSVNMIHEQPSFFGIIHTGSESLKRFSRLVASQHMQLFVVLLFPARLLLVEACNLISFR* 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00853 714 CDD Lipase_3 315 493 - -
Lapu6g00853 714 SUPERFAMILY alpha/beta-Hydrolases 343 528 IPR029058 -
Lapu6g00853 714 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 29 703 IPR043367 GO:0008970
Lapu6g00853 714 Pfam Lipase (class 3) 361 497 IPR002921 GO:0006629
Lapu6g00853 714 Gene3D alpha/beta hydrolase 301 526 IPR029058 -
Lapu6g00853 714 Coils Coil 611 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00853 Lapu-Chr6 8735896 8738848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00853 1 714 Acyl Lipid Metabolism Gene Families AT1G02660 54.178 0.0 714
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00853 - - gmx:100788786 1047.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00853 6 8735896 8738848 Lapu6g00853 6 8735896 8738848 ECH
Lapu6g00853 6 8735896 8738848 Lapu7g00570 7 6447360 6450953 PCT