Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00845 ATGGTCAAAACGGCGTCGTCGCCTTCTTCCTCTCCGGTCACCATAACGGTGTCGTCCGGAGGACGACGCAGAAGCATGGGACTAACCAGTCCCGTTCCTCGCGCCTCAGTCTCCACCAACAACCCCACTTCCCCTCTCCGAGCTTCCGGTGGAGGTCGGAGACTCTCCGGCGCCGGTGCTGATGGTGGCATCGAAGAGATGAACTCCGAGTACGTGACGTACACCGTCCACATTCCCCCGACGCCCGACCGCAAGCCCCTGACAATCTCGGAAGACGGAAAAGGCAGCACGAGTTTCATCTCCGGCACGATTTTCACCGGAGGCTACAACTCCGTGACTCGCGGCCAGCCCTCCATGGAAATCGAGGTGCTGCCGAAATCCACGTCGGTTTGCGGAATGAAGGGTTGCGACGAGGAAGCGATGAAAGGAAGATTGTGTGATCCGTGCGAGTGCGGGTTCAGGATCTGCAGGGAGTGTTACTTGGAGTGTGTTGGGAACAATGGTGGAGGAAAGTGTCCTGGGTGCAAATCGCGTTATAAGTATGCGAGTGATGATGAAGACGACGAAGAGGAAGAGGGATCTGAGGGTGAGGATCAGCCTCTGCCTCTGCCTTCCATGGCAGAGGTGAAGTTGGACAAGAGGTTTTCTCTTGTGAAGTCCTTCAAAGCGCAGAATCATCCTCCGGAATTTGACCACACGCGATGGCTGTTTGAGACGAAGGGGACCTATGGCTATGGAAACGCTGTGTGGCCTAAAGATGGTTACGGTGCTAACGGGTTTGAACCCCCTCCGGAGTTCGGAAAGAAAGCGAAGAGACCCTTGACCCGCAAGGTTGGAGTTTCAGCTGCTATTCTCAGTCCTTATAGGATGCTTATTCTACTGCGTCTTGCTGCTTTGGGTTTATTTCTTACATGGAGAATAAGACACCCAAACCATGAAGCGATTTGGCTGTGGGCAATGTCCATAACTTGTGAGCTATGGTTTGCATTTTCTTGGATTCTTGATCAGCTTCCTAAGCTCTGTCCTGTGAACAGAGTCACTGATCTATCTGTTCTGAAAGAGCGGTTTGAGTCTCCAAACCTGCGCAACCCAAAAGGAAGATCTGATCTACCAGGAATTGATGTGTTTGTTTCGACGGCAGACCCTGAAAAGGAGCCTCCTCTTGTCACTGCCAACACCATTCTCTCCATCCTTGCAGTTGATTATCCAGTGGAGAAGGTTGCCTGTTACTTGTCTGATGATGGTGGAGCTCTGTTGACATTTGAAGCTCTGGCTGAGACTGCTAGTTTTGCTAGAATTTGGGTTCCTTTCTGTCGGAAGCACCAGATTGAACCCAGGAATCCTGAAGCTTATTTTGGGCAGAAACGTGATTTTCTCAAGAATAAGGTCCAGTTGGACTTTGTGAGAGAGAGGAAAAGGGTGAAGAGGGAATATGATGAGTTCAAAGTGAGGATAAACTCCTTGCCGGAGTCCATTAGGAGAAGATCCAATGCTTACAATGCTCATGAGGAGCTACGAGTCAAGAAGAAACAGATGGAAACAGATGCCAATGTCTCCGAACCTGTTAAGGTTCCCAAAGCTACGTGGATGTCCGATGGTTCTCATTGGCCAGGAACTTGGACATCAGCAGAACAAGACCACTCAAGGGGGGACCATGCTGGCATAATTCAGGCAATGTTAGCTCCACCAAATGCAGAACCGGAATTTGGTGCAGAAGCTGATGGAGATAACTTGATTGATACAACAGGTGTTGATATTAGGTTGCCCATGCTCGTTTACGTGTCTCGTGAGAAGAGGCCAGCATATGACCACAACAAGAAAGCAGGTGCAATGAATGCTCTTGTTCGCACCAGTGCCATCATGTCCAATGGACCATTCATTCTGAATCTTGATTGTGATCATTACATCTACAACTCCTTGGCTCTAAGAGAAGGTATGTGCTTTATGCTTGATAGGGGTGGTGATAGGATATGTTACGTTCAGTTCCCTCAAAGGTTTGAGGGCATTGACCCCAGTGACAGATATGCAAATCACAACACTGTGTTCTTCGATGTGAGCATGAGAGCTCTTGATGGCTTACAAGGCCCCATGTACGTGGGAACAGGCTGCATATTCAGAAGAACAGCTCTGTATGGATTTAGTCCTCCTAGAACCACAGAACATCATGGGTGGTTTGGCAGGAGGAAGATTAAGCTGTTTCTGAGAAAGCCAAAGGTCTCAAAAAAGAAAGAGGATGAAGTTTCTGTGCCAATAAGTGATCACAATGATGATGATGCAGACATAGAGTCCTTGCTTCTTCCCAAAAGATTTGGGAATTCTACTTCTCTTGCCGCATCCATTCCTGTGGCGGAATACCAGGGAAGGTTGCTTCAGGATTTGCAAGGAAAGGGAACACATGGAAGGCCAGTAGGTTCTCTTGCCGTGCCTCGTGAGCCATTGGATGCGGCCACTGTTGCCGAGGCAATAACTGTGATATCTTGTTTCTATGAAGATAAAACTGAATGGGGCAAACGAGTGGGATGGATATATGGTTCAGTTACAGAAGACGTGGTCACTGGTTACAGAATGCACAATAGAGGGTGGAGATCAGTGTACTGTGTGACAAAAAGGGATGCCTTTAGAGGATCAGCTCCAATCAATTTGACAGACAGGCTCCACCAAGTGCTTCGATGGGCCACAGGTTCGGTTGAAATCTTTTTCTCAGCTAACAATGCCTTATTAGCAAGTCCTAGAATGAAATTCCTGCAGAGGGTGGCATATTTAAATGTAGGAATATACCCTTTCACCTCAATCTTTTTGATAGTCTATTGCTTCCTACCCGCAATGTCTTTATTTTCGGGTCAGTTTATAGTCCAATCTCTCAGTGTAACTTTTCTAATATTCTTGTTGGGGATCACAATTACACTCTGTTTGCTTGCACTTCTGGAGATCAAATGGTCAGGAATCACTCTACATGATTGGTGGAGAAATGAACAATTCTGGCTAATAGGTGGAACAAGTGCACACGCTGCCGCTGTTTTACAAGGGTTATTGAAGGTAATAGCAGGAGTGGAGATATCATTCACCTTAACTTCAAAGTCAGCCACTCCAGAAAATGAAGATGATGAGTTTGCTGACCTCTATGAGGTGAAGTGGAGCTTTCTAATGATCCCTCCGATTACTATTATGATGGTGAACGCCATTGGTATTGCTGTAGGAGTAGCTAGGACCATGTACAGTCCCTTTCCACAATGGAGCAGACTAGTAGGAGGGGTGTTTTTCAGTTTCTGGGTGTTGTGCCATCTTTATCCTTTTGCAAAGGGCCTCATGGGAAGAAGGGGAAAGATTCCTACCATCATTTATGTTTGGTCTGGATTACTCTCCATTATTATTTCTTTGCTCTGGGTATACATAAACCCTCCTTCAGGAAGAACAGAAGATTATATGACTTTCAAATTTCCTTGA 3444 0.4707 MVKTASSPSSSPVTITVSSGGRRRSMGLTSPVPRASVSTNNPTSPLRASGGGRRLSGAGADGGIEEMNSEYVTYTVHIPPTPDRKPLTISEDGKGSTSFISGTIFTGGYNSVTRGQPSMEIEVLPKSTSVCGMKGCDEEAMKGRLCDPCECGFRICRECYLECVGNNGGGKCPGCKSRYKYASDDEDDEEEEGSEGEDQPLPLPSMAEVKLDKRFSLVKSFKAQNHPPEFDHTRWLFETKGTYGYGNAVWPKDGYGANGFEPPPEFGKKAKRPLTRKVGVSAAILSPYRMLILLRLAALGLFLTWRIRHPNHEAIWLWAMSITCELWFAFSWILDQLPKLCPVNRVTDLSVLKERFESPNLRNPKGRSDLPGIDVFVSTADPEKEPPLVTANTILSILAVDYPVEKVACYLSDDGGALLTFEALAETASFARIWVPFCRKHQIEPRNPEAYFGQKRDFLKNKVQLDFVRERKRVKREYDEFKVRINSLPESIRRRSNAYNAHEELRVKKKQMETDANVSEPVKVPKATWMSDGSHWPGTWTSAEQDHSRGDHAGIIQAMLAPPNAEPEFGAEADGDNLIDTTGVDIRLPMLVYVSREKRPAYDHNKKAGAMNALVRTSAIMSNGPFILNLDCDHYIYNSLALREGMCFMLDRGGDRICYVQFPQRFEGIDPSDRYANHNTVFFDVSMRALDGLQGPMYVGTGCIFRRTALYGFSPPRTTEHHGWFGRRKIKLFLRKPKVSKKKEDEVSVPISDHNDDDADIESLLLPKRFGNSTSLAASIPVAEYQGRLLQDLQGKGTHGRPVGSLAVPREPLDAATVAEAITVISCFYEDKTEWGKRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGSAPINLTDRLHQVLRWATGSVEIFFSANNALLASPRMKFLQRVAYLNVGIYPFTSIFLIVYCFLPAMSLFSGQFIVQSLSVTFLIFLLGITITLCLLALLEIKWSGITLHDWWRNEQFWLIGGTSAHAAAVLQGLLKVIAGVEISFTLTSKSATPENEDDEFADLYEVKWSFLMIPPITIMMVNAIGIAVGVARTMYSPFPQWSRLVGGVFFSFWVLCHLYPFAKGLMGRRGKIPTIIYVWSGLLSIIISLLWVYINPPSGRTEDYMTFKFP* 1148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00845 1147 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 272 1117 - -
Lapu6g00845 1147 SUPERFAMILY RING/U-box 141 182 - -
Lapu6g00845 1147 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 582 725 IPR029044 -
Lapu6g00845 1147 MobiDBLite consensus disorder prediction 1 63 - -
Lapu6g00845 1147 MobiDBLite consensus disorder prediction 1 47 - -
Lapu6g00845 1147 Pfam RING/Ubox like zinc-binding domain 134 180 - -
Lapu6g00845 1147 SUPERFAMILY Nucleotide-diphospho-sugar transferases 388 940 IPR029044 -
Lapu6g00845 1147 FunFam cellulose synthase-like protein D3 578 715 - -
Lapu6g00845 1147 MobiDBLite consensus disorder prediction 183 204 - -
Lapu6g00845 1147 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 118 200 IPR013083 -
Lapu6g00845 1147 Pfam Cellulose synthase 373 1139 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00845 Lapu-Chr6 8670105 8674926 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00845 34 1147 Glycosyltransferase AT3G03050 65.551 0.0 1519
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00845 K00770 - gmx:100804687 2057.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00845 6 8670105 8674926 Lapu6g00845 6 8670105 8674926 ECH