Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00833 ATGCAATCAAAACCAAAGCTTGGTCGGCTTCCTAGTATCAGAGACCGAGTTGAAGACACTCTCTCAGCTCACCGTAACGAACTCATCTCTCTCCTCTCCAGGTATGTGGCTCAGGGGAAAGGGATTTTGCAACCCCATAACTTAATTGATGAACTTGACAACATGCCTGGTGACGATGAAGCAAAATTGGATCTTAAAAATGGCCCTTTCGGTGAAATTGTCAGGGCTGCACAGGAAGCCATAGTTTTGCCTCCTTTTGTGGCAATAGGAGTTCGTCCAAGACCTGGTGTTTGGGAATATGTCCGTGTTAATGTCTCTGAACTCAGTGTGGAGCAATTAAGCGTTGCTGAATATCTCAGCTTTAAGGAAGAACTTGTGGACGGAAAGACTCATGACAATTTTGTGCTGGAACTTGATTTTGAGCCATTTAATGCCTCATTTCCTCGTCCATCCCGCTCATCATCCATTGGCAATGGTGTCCAATTTCTCAATCGCCACCTTTCATCAATTATGTTTCGTAACAAAGATTCCTTGGACCCCTTGCTTGATTTCCTCCGAGCTCACAAATACAAGGGCCATGCTCTGATGTTAAATGATAGAATACAAAACATTTCCAAACTTCAGGCTGCTCTGGCCAAGACTGAGGATTATCTTTCTAAGATTCCACGTGACACACCCTATTCAGAGTTTGAATATGTTTTGCAAGGAATGGGTTTTGAGAGAGGTTGGGGTGATACAGCTCAAAGGGTATTAGAAATGATGCATCTGCTACTGGATATTCTTCAGGCTCCTGATCCTTCTACACTAGAGACTTTTCTTGGCAGAGTGCCAATGGTATTCAATGTTGTTATATTATCTCCTCATGGCTTCTTCGGACAAGCCAATGTCTTGGGTTTGCCTGACACTGGTGGGCAGGTTGTTTATATACTAGATCAAGTGCGTGCCCTTGAGAATGAGATGCTCCTTCGGATTAAGAAACAAGGACTAGATTTCACTCCCAGAATTCTAATTGTTACCAGGCTAATACCTGATGCAAAGGGGACAACTTGCAACCAACGACTAGAAAGAGTCAGTGGTACTGACCACACTCATATTTTGCGAGTTCCATTCAGATCAGAGACAGGAACACTTCGTAAATGGATTTCAAGGTTTGATGTGTGGCCTTATCTGGAGACTTATGCGGAGGATGTTGCTAGTGAAATTGCTGCTGAGTTACAAGGTTATCCTGACTTCATAATTGGAAACTACAGTGATGGGAATCTTGTTGCATCTTTATTGGCTTATAAAATGGGAGTTACACAGTGCACCATCGCGCATGCACTTGAGAAGACAAAATATCCGGATTCAGATATATATTGGAAGAAATTTGATGATAAATATCACTTTTCATGCCAGTTCACTGCTGATCTAATAGCCATGAATAATGCTGATTTTATCATCACCAGTACTTACCAAGAGATTGCTGGAACGAAAAATACCGTTGGACAGTATGAGAGTCACACTGGTTTTACTCTTCCTGGGCTGTATAGGGTTGTCCATGGCATTGATGTTTTTGATCCCAAGTTCAATATTGTCTCACCTGGAGCAGATATGTCAATATATTTCCCCTACTCTGAAAAGCAGAACAGGCTTACATCCCTACATGGTTCAATTGAACAGCTATTGTATGATACAACACAGACTGATGAATACATTGGATCACTGAAAGACAAGTCAAAGCCCATAATTTTCTCCATGGCAAGGCTAGACAGAGTGAAGAACATAACTGGATTGGTTGAATGCTTTGCTAAGAACAGCAAATTGAGGGAACTGGTCAACCTTGTTGTAGTAGCTGGTTACATTGATGTAAAGAAGTCCAGCGACAGAGAAGAAATTGCAGAAATTGAGAAGATGCATAGTCTGATGAAAGAGTACAAATTAAATGGTGATTTTCGTTGGATTGCTGCCCAAACAAATAGGGCACGTAATGGGGAGCTGTATCGCTACATAGCAGACACACAAGGTGCTTTCGTTCAGCCTGCTTTCTATGAAGCTTTTGGGCTTACAGTTGTGGAGGCCATGACCTGTGGACTCCCCACATTTGCTACTTGCAATGGTGGTCCTGCTGAGATCATCGAGCATGGTATATCAGGATTTCACATTGATCCTTATCACCCTGATCAAGCTTCAGAGCTATTGGTTGAATTCTTCCAGAAGTGCAAGACGGACCCAAGCCATTGGAAGAAAATATCTGATTCTGGTCTTCAGAGAATTTATGAAAGGTACACTTGGAAGATTTATTCCGAAAGGCTCATGACCTTGGCGGGAGTTTACAGTTTCTGGAAATACGTTTCCAAATTAGAGAGGCGTGAAACAAGACGATATCTTGAGATGTTCTATATCCTCAAGTTCCGCGATTTGGTAAGTCACATGACATTTGTTCAAGCAGGATTACGAACTTTATCATCTTGA 2451 0.4211 MQSKPKLGRLPSIRDRVEDTLSAHRNELISLLSRYVAQGKGILQPHNLIDELDNMPGDDEAKLDLKNGPFGEIVRAAQEAIVLPPFVAIGVRPRPGVWEYVRVNVSELSVEQLSVAEYLSFKEELVDGKTHDNFVLELDFEPFNASFPRPSRSSSIGNGVQFLNRHLSSIMFRNKDSLDPLLDFLRAHKYKGHALMLNDRIQNISKLQAALAKTEDYLSKIPRDTPYSEFEYVLQGMGFERGWGDTAQRVLEMMHLLLDILQAPDPSTLETFLGRVPMVFNVVILSPHGFFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKKQGLDFTPRILIVTRLIPDAKGTTCNQRLERVSGTDHTHILRVPFRSETGTLRKWISRFDVWPYLETYAEDVASEIAAELQGYPDFIIGNYSDGNLVASLLAYKMGVTQCTIAHALEKTKYPDSDIYWKKFDDKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTGFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYSEKQNRLTSLHGSIEQLLYDTTQTDEYIGSLKDKSKPIIFSMARLDRVKNITGLVECFAKNSKLRELVNLVVVAGYIDVKKSSDREEIAEIEKMHSLMKEYKLNGDFRWIAAQTNRARNGELYRYIADTQGAFVQPAFYEAFGLTVVEAMTCGLPTFATCNGGPAEIIEHGISGFHIDPYHPDQASELLVEFFQKCKTDPSHWKKISDSGLQRIYERYTWKIYSERLMTLAGVYSFWKYVSKLERRETRRYLEMFYILKFRDLVSHMTFVQAGLRTLSS* 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00833 816 Gene3D Glycogen Phosphorylase B; 283 800 - -
Lapu6g00833 816 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 298 766 - -
Lapu6g00833 816 Pfam Glycosyl transferases group 1 568 732 IPR001296 GO:0016757
Lapu6g00833 816 FunFam Sucrose synthase 12 148 - -
Lapu6g00833 816 PANTHER - 9 804 IPR012820 GO:0005985|GO:0016157
Lapu6g00833 816 Pfam Sucrose synthase 9 556 IPR000368 GO:0005985|GO:0016157
Lapu6g00833 816 Gene3D Glycogen Phosphorylase B; 530 757 - -
Lapu6g00833 816 FunFam Sucrose synthase 149 278 - -
Lapu6g00833 816 FunFam Sucrose synthase 283 569 - -
Lapu6g00833 816 Gene3D - 12 148 - -
Lapu6g00833 816 Gene3D - 149 278 - -
Lapu6g00833 816 NCBIfam sucrose synthase 25 803 IPR012820 GO:0005985|GO:0016157
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00833 Lapu-Chr6 8556407 8562856 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00833 3 801 Glycosyltransferase AT4G02280 83.229 0.0 1425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00833 K00695 - gmx:100793371 1526.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00833 6 8556407 8562856 Lapu6g00833 6 8556407 8562856 ECH