Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00825 ATGGAACGTTCTACAAAACTCTTCTCGGTGTTGGTTCTATGCATAGCTGTAATGGCACATCAGGGAGTTGCATTAGACATACTAAAAGGAAATAATTTAATTGGCAAGGAAACATTAAAAGGAAAGAGTCTAATCAACAAGGTATGCACAATCTCCCCAAGCAAAGACCTCTGCGTTCAGGTTCTCTCATCCGACCCACTCAGAAGCCCTAACGCAGACCTTAAAGACTTGGCAATCATTTCCCTTAGGGTTGCTGCCAGAAACGCTTCTGGCATCCTCAATGATGCTAAACTACTCATCGATGACGACAATCTAGACCCTGATGTTCAACAAGGTTTGGCTGATTGCAAGGAGAACATACTGGACGCAGAGAGCCAGCTGGAGGACACCATTGCTGCTTTGATGGTCGATTCTGATGCTGACTCACAGGTTTGGCTCAAAGCTGCTTTGGCTGCAATCGACACCTGCGACGCCTCCATCCCCGGAGACGATGATGTTCTCTCTGTTAAGAGCGCCATCTTCCGCAAACTCTGTAAGATTGCCATCGCCATCAGCAAGGAGGTTGCTAATCCACATATATTGTAA 585 0.4632 MERSTKLFSVLVLCIAVMAHQGVALDILKGNNLIGKETLKGKSLINKVCTISPSKDLCVQVLSSDPLRSPNADLKDLAIISLRVAARNASGILNDAKLLIDDDNLDPDVQQGLADCKENILDAESQLEDTIAALMVDSDADSQVWLKAALAAIDTCDASIPGDDDVLSVKSAIFRKLCKIAIAISKEVANPHIL* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00825 194 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 43 187 IPR035513 -
Lapu6g00825 194 Coils Coil 113 133 - -
Lapu6g00825 194 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 183 - -
Lapu6g00825 194 Gene3D Invertase/pectin methylesterase inhibitor family protein 41 188 IPR035513 -
Lapu6g00825 194 SMART PMEI_2 40 184 IPR006501 GO:0004857
Lapu6g00825 194 NCBIfam pectinesterase inhibitor domain 38 187 IPR006501 GO:0004857
Lapu6g00825 194 CDD PMEI-like_1 44 187 - -
Lapu6g00825 194 Pfam Plant invertase/pectin methylesterase inhibitor 43 184 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00825 Lapu-Chr6 8490944 8491528 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00825 - - gmx:102667060 283.878