Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00820 ATGATGCTTTCCTCCAAACCTCCGCGCCGGAAAATTGTTCCGGCAAATGGCGATGAGTCCGCCGACAAACTGGACCAGCTTCTGTTGTCCTCCGCCATCTGCAACAACGAGGACATAGGCCCGTTCATCCGCAAGGCCTTCGCCTCCGGGAAGCCGGAGACGCTCCACCACCACCTACGTCACTTTGCGCGCTCGAAGGAGTCCGAGATTGAGGAAGTGTGCAAGGCTCACTACCAGGACTTCATCCTCGCCGTCGATGATCTACGATCCCTCCTCTCAGATGTCGATTCGCTGAAGTCCTCCCTCTCTGACTCCAACTCGCGGCTCCAGTCCGTTGCCCGCCCGCTCTTATCTTCGCTCGACGCCTTCGTCGAGACGCGGAACGTCTCGAAGAACGTGAACCTGGCCATCGACTCCATTCGGACGTGCGTCAAGCTGATGGAGGTTTGCACGCGTGCCAACCGCCACCTCGCGGACGACAACTTCTACATGGCGCTCAAGTGCGTGGACGCGATCGAGCGGGAGTACTTGGACATAACGGCGTCGTCCACGCTGAAGCGGATGCTGGAGAAGAAGATTCCAGAGATTCGGTCGTACATAGAGAGGAAGGTGAACAAGGAGTTCGGGGACTGGTTGGTGGAGATCCGAGTCGTGAGTCGCAATTTAGGTCAATTGGCGATAGGTCAAGCCTCGTCAGCGAGGCAGAGAGAAGAGGATCTAAGAATTAAGCAACGCCAAGCGGAGGAACAGAGTAGACTCAGCGTGAGAGACTGTATTTACGCTTTGGAGGAAGAGGATGAAGACGGAATCATCGCTGGCGGGATCGGCGAAGACGGCGGTGGAGTCGCCGGGTTTGATTTGACTTCGTTGTACAGGGCTTACCATATTCATCAGACGTTAGGGTTAGAGGATCGGTTTAAGCAATATTATTTTGAGAATCGGAAGCTTCAGTTGACTTCGGACTTTCAGGTCTCGTCTATGACTCCTTTTCTGGAGTCGCATCAAACGTTCTTTGCGCAGATTGCAGGGTTCTTTGTGGTGGAGGATCGCGTGTTGAGGACCGGCGGTGGCTTGATATCAAAATTGGAGGTTGAGAATCTGTGGGAGATTGCTGTTAGTAAGATGTGTTCTGTGTTGGAGGATCAGTTCTCCAGAATGCAAACTGCTAATCATCTTTTGCTTATTAAGGATTATGTGAGTCTGTTGGGAGTAACCCTGCGGAGATATGGGTACCCCATTGATGCGTTGCTTGATGTTTTGAGCAAACACAGGGATAAGTACCACGAGCTGCTTTTGTCTGATTGTAGGAAGCAGATTGCGGAGGCTGTTGCGGCTGATAAATTTGAGCAGATGTTGATGAAAAAAGAGTATGAGTATTCCATGAATGTGCTTTCTTTCCAGATACAGACTACGGATATCATACCGGCATTTCCCTATGTTGCCCCTTTTTCAACCACTGTGCCGGATTGTTGTCGGATTGTACGGTCATTCATTGAGGATTCTGTGAGTTTCATGTCTTATGGCGGGCAGCTTGAGTTCTACGAAGTTGTTAAGAAATACTTGGACAGGCTTTTGATTGAGGTTTTGGATGAAGCTTTAGTGAAGCTTATCAATACATCGATTAGTGGTGTTTCCCAGGCAATGCAAATGGCAGCTAATATGGCTGTCTTGGAGCGTGCTTGTGATTTTTTCTTTCGCCATGCTGCACAGCTTTCGGGTGTTCCCTTGAGAATGGTGGAGAGAAGCAGAAGGCAGTTTCCCCTAAGAAAAGCTCGTGATGCTGCAGAACAGATGCTCTCTGGACTACTCAAAGCCAAAGTTGATGGATTTATGACCTTGATCGAGAATGTAAATTGGATGTGTGATGAGGCACCTCAGAGTGGAAATGAATATGTAAATGAGGTTATAATTTATTTGGAAATTTTGGTTTCAACTGCTCAACAGATATTGCCATCTCAAGTCCTTAAGAGAGTATTGCAGGAAGTTTTTGCTCACATATCCGAGAAGATAGTTGGGACTTTAGTCAGTGATTCTGTTAAAAGGTTTAATGTCAATGCTATTAATGGAATTGAAGTAGACATTCGACTCTTAGAATCATTTGCTGATAATCAGGCCTCCCTTTTTTCTGATGGGGATGTTGATATTTTGAAAGCATCACTTGCCAGTTCAAAGCAACTGATTAATTTGCTATTGAGTAATCATCCAGAGAACTTCTTGAATCCAGTGATAAGGGAGAGGAGTTACAACACTTTGGACCACAAGAAAGTGGTAATTGTTTCAGAAAAGTTGAGGGATCCTTCAGATCGGCTCTTTGGAACCTTTGGTAGTCGTGGGGCCAGGCAAAATCCGAAAAGGAAATCATTGGATACATTGATAAAAAGACTTAAGGATGTTAGCTGA 2400 0.4729 MMLSSKPPRRKIVPANGDESADKLDQLLLSSAICNNEDIGPFIRKAFASGKPETLHHHLRHFARSKESEIEEVCKAHYQDFILAVDDLRSLLSDVDSLKSSLSDSNSRLQSVARPLLSSLDAFVETRNVSKNVNLAIDSIRTCVKLMEVCTRANRHLADDNFYMALKCVDAIEREYLDITASSTLKRMLEKKIPEIRSYIERKVNKEFGDWLVEIRVVSRNLGQLAIGQASSARQREEDLRIKQRQAEEQSRLSVRDCIYALEEEDEDGIIAGGIGEDGGGVAGFDLTSLYRAYHIHQTLGLEDRFKQYYFENRKLQLTSDFQVSSMTPFLESHQTFFAQIAGFFVVEDRVLRTGGGLISKLEVENLWEIAVSKMCSVLEDQFSRMQTANHLLLIKDYVSLLGVTLRRYGYPIDALLDVLSKHRDKYHELLLSDCRKQIAEAVAADKFEQMLMKKEYEYSMNVLSFQIQTTDIIPAFPYVAPFSTTVPDCCRIVRSFIEDSVSFMSYGGQLEFYEVVKKYLDRLLIEVLDEALVKLINTSISGVSQAMQMAANMAVLERACDFFFRHAAQLSGVPLRMVERSRRQFPLRKARDAAEQMLSGLLKAKVDGFMTLIENVNWMCDEAPQSGNEYVNEVIIYLEILVSTAQQILPSQVLKRVLQEVFAHISEKIVGTLVSDSVKRFNVNAINGIEVDIRLLESFADNQASLFSDGDVDILKASLASSKQLINLLLSNHPENFLNPVIRERSYNTLDHKKVVIVSEKLRDPSDRLFGTFGSRGARQNPKRKSLDTLIKRLKDVS* 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00820 799 Coils Coil 788 799 - -
Lapu6g00820 799 Gene3D - 413 585 IPR042045 -
Lapu6g00820 799 PANTHER SEC15 16 797 IPR007225 GO:0006886|GO:0090522
Lapu6g00820 799 Pfam Exocyst complex subunit Sec15-like 459 763 IPR046361 -
Lapu6g00820 799 Coils Coil 230 250 - -
Lapu6g00820 799 Gene3D Dsl1p vesicle tethering complex, Tip20p subunit, domain D 591 738 IPR042044 -
Lapu6g00820 799 FunFam Exocyst complex component 413 581 - -
Lapu6g00820 799 PIRSF Sec15 3 799 IPR007225 GO:0006886|GO:0090522
Lapu6g00820 799 FunFam Exocyst complex component 591 738 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00820 Lapu-Chr6 8444535 8448965 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00820 K19985 - gmx:100796432 1450.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00820 6 8444535 8448965 Lapu6g00820 6 8444535 8448965 ECH