Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00802 ATGCTTCCTCTCTCCCTTCTCAAAACTGCCCAAGGCCACCCTATGTTGGTGGAACTGAAGAATGGAGAGACTTATAACGGGCATTTGGTTAATTGCGATACATGGATGAACATCCATCTCCGAGAAGTCATTTGTACATCTAAAGATGGAGATAGATTTTGGAGGATGCCTGAATGCTACATAAGAGGCAATACAATCAAGTACCTTCGAGTTCCTGATGAGGTCATTGACAAAGTTCAAGAAGAAACCAAGACCCGAGCTGATCGTAAACCACCTGGTGTGGGGCGTGGGAGGGGAAGAGGCAGAGAGGAAGGTCCTGGTGGACGCCAACCAAAAGGAATTGGGCGTGGTCTTGATGATGGTGGTGCCAAAGGAGCTGGAGGAGGTCGAGGCAAGGGTGGCCCAAGTGGAAAGCCTGGTGGAAGCAGAGGACGAGGTAGAGGCTGA 447 0.5011 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKTRADRKPPGVGRGRGRGREEGPGGRQPKGIGRGLDDGGAKGAGGGRGKGGPSGKPGGSRGRGRG* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00802 148 MobiDBLite consensus disorder prediction 80 109 - -
Lapu6g00802 148 SMART Sm3 5 71 IPR001163 -
Lapu6g00802 148 SUPERFAMILY Sm-like ribonucleoproteins 3 129 IPR010920 -
Lapu6g00802 148 ProSiteProfiles Sm domain profile. 2 75 IPR047575 GO:0003723
Lapu6g00802 148 Pfam LSM domain 6 70 IPR001163 -
Lapu6g00802 148 FunFam U6 snRNA-associated Sm-like protein LSm4 1 83 - -
Lapu6g00802 148 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM 2 133 IPR027141 GO:0006396
Lapu6g00802 148 CDD LSm4 2 77 IPR034101 GO:0000398|GO:0000956
Lapu6g00802 148 Gene3D - 1 83 - -
Lapu6g00802 148 MobiDBLite consensus disorder prediction 80 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00802 Lapu-Chr6 8307321 8310724 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00802 K12623 - tcc:18613544 216.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00802 6 8307321 8310724 Lapu6g00802 6 8307321 8310724 ECH