Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00800 ATGTTAGAAAAGTGTTTGGGAGCTCAAAGGGCGCGAAGATTCCAGAGAGCTCTCAGGCATTGCAAGGTCACCATCCTCTGCCTGGTCCTCACCATTGTTGTCCTGCGCGGTACCATCGGTGCCGGAAAATTCGGCACGCCGGAGCAGGACTTCGTCGACATTCGCGACCGCTTCTACTCCCGCAAACTCCCTGAGCACCACCGCTTCCTCGGCGAGCTTGAATCCACGACGTCCTTTTCCTCTTCCGACGATTCCACTTCCACCACCAATTACAACGCGTTCGACATCAACACCATATTGGTCGACGAACCAGAAGACGAGAACGTCGAGAAATTGAACCCGCACGAGCCGTATCGTCTCGGCCCCAAAATATCAACCTGGGACGAACAACGTTCTGGCTGGCTTCGCAAGAACCCAAATTTCTCTAATTTCGTTCGGTCCAACAAGCCTCGTGTGCTTCTGGTAACTGGGTCGTCGCCGAAACCGTGCGAGAATCCCGTTGGGGATCATTACTTGTTGAAGTCTATTAAGAACAAAATTGACTATTGTCGTTTGCATGGGATTGAGGTGTTTTACAATATGGCTCTCCTGGACGCTGAGATGGCAGGCTTTTGGGCCAAGCTTCCTTTGATTCGGAAGCTTCTTTTGTCTCATCCTGAGGTGGAGTTTCTATGGTGGATGGATAGTGATGCCATGTTCACGGACATGGCGTTTGAGGTGCCGTGGGAGAGGTATAAAGACCATAACTTGGTAATGCATGGGTGGGATGAGATGGTTTATGATGACAAGAATTGGATTGGGTTGAACACTGGGAGTTTTTTATTGAGAAATTGTCAGTGGTCTTTGGATATCCTTGATGCTTGGGCTCCAATGGGGCCTAAAGGGAGGGTTAGGGATGAGGCTGGGAAAGTTCTCACGCGTGAGCTCAAGGATAGACCTGTTTTTGAGGCTGATGATCAATCTGCAATGGTTTATCTGCTGGCTAAGGATAGGGACAAGTGGGGTGATAAGGTTTATCTTGAGAACGGCTATTACTTGCATGGTTATTGGGGGATTTTGGTTGATAAGTACGAGGAGATGATTGAGAATTACCATCCTGGTCTTGGGGATCATAGGTGGCCTTTGGTGACTCATTTTGTGGGGTGCAAACCTTGTGGGAAGTTTGGGGATTACCCTGTTGAGAGGTGCTTGAAACAGATGGATAGGGCCTTCAATTTTGGGGATAATCAGATACTGCAGATTTATGGATTCACGCATAAATCGTTGGCTAGTAAGGGAGTTAAGAGAATACGGGATGAGACTAGCAATCCCCTTGAGGTCGAGGATGGACTTGGGTTGCTTCATCCAAGCATTTAA 1356 0.4853 MLEKCLGAQRARRFQRALRHCKVTILCLVLTIVVLRGTIGAGKFGTPEQDFVDIRDRFYSRKLPEHHRFLGELESTTSFSSSDDSTSTTNYNAFDINTILVDEPEDENVEKLNPHEPYRLGPKISTWDEQRSGWLRKNPNFSNFVRSNKPRVLLVTGSSPKPCENPVGDHYLLKSIKNKIDYCRLHGIEVFYNMALLDAEMAGFWAKLPLIRKLLLSHPEVEFLWWMDSDAMFTDMAFEVPWERYKDHNLVMHGWDEMVYDDKNWIGLNTGSFLLRNCQWSLDILDAWAPMGPKGRVRDEAGKVLTRELKDRPVFEADDQSAMVYLLAKDRDKWGDKVYLENGYYLHGYWGILVDKYEEMIENYHPGLGDHRWPLVTHFVGCKPCGKFGDYPVERCLKQMDRAFNFGDNQILQIYGFTHKSLASKGVKRIRDETSNPLEVEDGLGLLHPSI* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00800 451 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 147 298 IPR029044 -
Lapu6g00800 451 FunFam xyloglucan 6-xylosyltransferase 2 148 299 - -
Lapu6g00800 451 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 7 442 IPR008630 GO:0016020|GO:0016757
Lapu6g00800 451 Pfam galactosyl transferase GMA12/MNN10 family 149 388 IPR008630 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00800 Lapu-Chr6 8298618 8300158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00800 1 451 Glycosyltransferase AT4G02500 79.956 0.0 737
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00800 K08238 - gmx:100794266 839.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00800 6 8298618 8300158 Lapu6g00800 6 8298618 8300158 ECH