Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00794 ATGTTCCTTACTTCCTTTGGCCACCAACAAACACATAGACACCTTAACTTAGATCAACTTTCCTCATCCCTTTATTTCCACTCCACCGAGGTACCAACCTACCAAATGGCAGCCAAGCCAGCTGAAGAACCTCCTCAAGGAGAAACTCTCAAGTATCAGACGTGGGTTCTGAAAGTATTGATCCACTGTGATGGCTGCAAAAAGAGAGTCAAGAAAATTCTTCAAGGAATTGATGGGGTTTATAAAACAGAGGTTGATTCTCTGCAGCACAAGGTTACGGTCACTGGTAACGTCGACGCTGAGACTCTCATCAAGAGGCTTTCAAGATCAGGGAGGCTAGTGGAGCTTTGGCCAGAAAAACCAGCTGAGAAGAAAGACAATAAAAAAACTGGAAAATCCAATAAGGGTGGTGATGTTAACAAGGAGAAGGAAGACCAAAAGAAAGGTGAACCAGGTGCTGATGGTGGTTCAAATGAGGGTTCTAAAGATGGTGCTGCGGAAGATTCTGACAAAGAAGAACACAGTGATGAATGTGAGGAGGGAGCTGGCGGCGGCGAAGGTGGCAAAAAGAAGAAAAAGAAGAAGAAGAAGAAGAACAAAGGGGAAAACGCTGGTTCTGAATCTGCTCCTCCTAAGAATGAAGAAGGAGGAGGAGAAATTAGTAAAGTTGATGCATTAGTGCCTTCAAATTTAGCCACTTCAATGGCTCCCAAGGATCTTGTTAGCCCTCCAATTCAGCATGCCTACCCATATCCACACGTGTATTATTCACCTCCTCCTCCTCCTGCTTATGGATTAAGCTATAACACAGCATATCCTATCTCTAGTGCTTCATATTATGTTGGGGCCCCTATCATGCCCATGCATGCTTACACTACTCCGTACTCTAGACTGCCACCACCTCCTCCACCGTCTGATCCAATCAAGCACTATGGTGATGATGAGGATGAGTACGAAGGTGGTGGATATTGCTCCATTATGTGA 984 0.4492 MFLTSFGHQQTHRHLNLDQLSSSLYFHSTEVPTYQMAAKPAEEPPQGETLKYQTWVLKVLIHCDGCKKRVKKILQGIDGVYKTEVDSLQHKVTVTGNVDAETLIKRLSRSGRLVELWPEKPAEKKDNKKTGKSNKGGDVNKEKEDQKKGEPGADGGSNEGSKDGAAEDSDKEEHSDECEEGAGGGEGGKKKKKKKKKKNKGENAGSESAPPKNEEGGGEISKVDALVPSNLATSMAPKDLVSPPIQHAYPYPHVYYSPPPPPAYGLSYNTAYPISSASYYVGAPIMPMHAYTTPYSRLPPPPPPSDPIKHYGDDEDEYEGGGYCSIM* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00794 327 ProSiteProfiles Heavy-metal-associated domain profile. 52 115 IPR006121 GO:0046872
Lapu6g00794 327 CDD HMA 61 111 IPR006121 GO:0046872
Lapu6g00794 327 Pfam Heavy-metal-associated domain 61 111 IPR006121 GO:0046872
Lapu6g00794 327 MobiDBLite consensus disorder prediction 115 219 - -
Lapu6g00794 327 SUPERFAMILY HMA, heavy metal-associated domain 52 117 IPR036163 GO:0046872
Lapu6g00794 327 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 46 327 - -
Lapu6g00794 327 MobiDBLite consensus disorder prediction 115 152 - -
Lapu6g00794 327 Gene3D - 50 114 - -
Lapu6g00794 327 MobiDBLite consensus disorder prediction 161 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00794 Lapu-Chr6 8251503 8253492 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00794 - - gmx:100783119 425.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00794 6 8251503 8253492 Lapu6g00794 6 8251503 8253492 ECH