Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00779 ATGCTTCACCGCATCACCCATTCCTCTTCTCCCTCTCTTCTCCTCCTTCCGCGTCTTCTCTCTCACCAACCCTTCTTCTCTTCCAATTTCAAATTCCCTTTCTCACTCTCGCCAAAACCTCTCACTCTCAACCTCATTTCCATGGCTTCTTCTCATTCCCTCCACAACCACACAAACCGACTCGCTTCCCAACAGAGCCCTTACCTTCTCCAACACGCACACAACCCTGTTGATTGGTATCCGTGGGGCGAAGAAGCCTTCGCCGAAGCGCGCAGGCGCGACGTGCCTATCTTCTTGTCTATTGGCTACAGCACTTGTCACTGGTGTCATGTTATGGAGGTCGAGTCTTTCGAGGACGCAGCAGTTGCCAAGTTGTTGAACGATTGGTTTGTTAGCATTAAGGTGGATCGAGAGGAGCGACCAGATGTTGATAAGGTATACATGACGTATGTGCAAGCTTTGTATGGTGGAGGAGGTTGGCCCCTGAGTGTGTTTCTTTCACCCGACTTGAAGCCTTTAATGGGTGGAACTTATTTCCCCCCTGATGATAAGTATGGACGACCTGGATTTAAGACTATACTAAGAAAGGTAAAACAGGCTTGGGATAGTAAAAGGGATACGCTGATTAAGAGTGGAGCATTTGCAATTGAACAGCTGTCAGAGGCACTGTCAGCTAGTTCAGATTCTGATAAACTGCCTGATGGGGTTCCGGCTGAGGCATTACGTCTGTGCTCAGAGCAGCTCTCTGGGGGATACGATTCAAAGTTTGGTGGGTTTGGATCTGCACCAAAGTTTCCTAGACCAGTTGAGATAAACTTGATGCTTTATCACTCCAAAAAGCTGGAGGAGACAGGAAAGTTGGATGGAGCTAATGGAAATCAGAAAATGGTTTTCTTTAGTTTGCAATGCATGGCAAAAGGCGGGATTCATGATCATATTGGAGGGGGCTTTCACAGATACAGCGTGGATGAGTGCTGGCACGTTCCACATTTTGAGAAGATGCTATATGATCAAGGGCAGCTTGCTAATGTTTATCTAGATGCGTTTTCTATCACTAAAGATACCTTCTATTCATATATATCACGGGATATCCTTGATTATTTAAGGAGAGATATGGTTGGTCCAGAGGGTGAAATCTTTTCAGCAGAGGATGCTGACAGTGCAGAGACCGAAGGAGCTGCAAGAAAAAAGGAAGGAGCCTTTTACATATGGGCAAGCAAAGAGATTCAAGACATACTTGGAGAGCATGCTGCCTTTTTTGAGGAGCACTATTACATAAAGCAATCGGGTAACTGTGACCTGTCTGAAATGAGTGATCCTCACAATGAATTCAAAGGAAAGAATGTCCTAATTGAGAGAAAGGAACCTTCAGAACTGGCATCAAAATATGGCATGTCAGTTGAGACATATCAAGAAATTCTTGGAGAATGTAGGCGTAAGTTGTTTGAAGCAAGGTCAAGGCGTCCAAAGCCACATTTGGATGACAAGGTTATTGTATCTTGGAATGGATTGGCAGTCTCTTCTTTTGCTAGGGCTTCTAAGATTCTGAAGGGCGAAGCTGAAGGGACCAAATTCTACTTTCCTGTTGTTGGCACCGAACCAAAGGAGTACTTGAGAATTGCAGAAAAAGCAGCATCTTTTATTAGGAAGCAACTTTATGATGTGGAGACTCACAGACTGTACCACAGTTTCAGACGTTCTCCATCTAAAGCTCCTGGTTTCTTGGATGACTATGCCTTTCTAATTTCAGGATTGCTGGATCTGTATGAGTTTGGTGGTGGAATTAGCTGGCTTGTATGGGCCATTGAATTGCAGGAAACCCAGGATACATTGTTTCTTGATAAGGCTGGAGGTGGATATTTCAATAATACAGGAGAAGATCCTTCAGTTCTCCTCCGCGTGAAGGAAGATCATGATGGGGCAGAACCCTCTGGAAACTCGGTTTCTGCTATAAATCTTATAAGATTGGCTTCCATGGTTTCTGGAAGTAAGGCTGAGAATTATAAGCGAAATGCAGAACATCTATTGGCAGTTTTTGAGAAAAGATTGAAAGATATGGCTATGGCAGTGCCTCTAATGTGTTGTGCAGCAGACATGTTGCGTGTACCTTCTCGGAAACAAGTGGTCGTAGTTGGTGAAAGAACGTCTGAGGAATTTGAAAACATGCTTGCTGCAGCTCATGCATTATATGACCCCAACAGAACAGTTATTCATATAGATCCCAACAACAAAGAAGAGATGGAATTTTGGGAAGTAAATAACAGCAATATCTCTCTCATGGCGAAAAATAACTACGCCGTCAACAAGGTTGTAGCTCTTGTTTGCCAAAACTTCACCTGCAGCCCCCCTTTGACTGATCGTTCTTCACTTGAAGCTTTGCTCTCCAAAAAACCTTTCTCTTCGTTCACATAA 2412 0.4411 MLHRITHSSSPSLLLLPRLLSHQPFFSSNFKFPFSLSPKPLTLNLISMASSHSLHNHTNRLASQQSPYLLQHAHNPVDWYPWGEEAFAEARRRDVPIFLSIGYSTCHWCHVMEVESFEDAAVAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSVFLSPDLKPLMGGTYFPPDDKYGRPGFKTILRKVKQAWDSKRDTLIKSGAFAIEQLSEALSASSDSDKLPDGVPAEALRLCSEQLSGGYDSKFGGFGSAPKFPRPVEINLMLYHSKKLEETGKLDGANGNQKMVFFSLQCMAKGGIHDHIGGGFHRYSVDECWHVPHFEKMLYDQGQLANVYLDAFSITKDTFYSYISRDILDYLRRDMVGPEGEIFSAEDADSAETEGAARKKEGAFYIWASKEIQDILGEHAAFFEEHYYIKQSGNCDLSEMSDPHNEFKGKNVLIERKEPSELASKYGMSVETYQEILGECRRKLFEARSRRPKPHLDDKVIVSWNGLAVSSFARASKILKGEAEGTKFYFPVVGTEPKEYLRIAEKAASFIRKQLYDVETHRLYHSFRRSPSKAPGFLDDYAFLISGLLDLYEFGGGISWLVWAIELQETQDTLFLDKAGGGYFNNTGEDPSVLLRVKEDHDGAEPSGNSVSAINLIRLASMVSGSKAENYKRNAEHLLAVFEKRLKDMAMAVPLMCCAADMLRVPSRKQVVVVGERTSEEFENMLAAAHALYDPNRTVIHIDPNNKEEMEFWEVNNSNISLMAKNNYAVNKVVALVCQNFTCSPPLTDRSSLEALLSKKPFSSFT* 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00779 803 CDD SSP411 80 202 IPR004879 -
Lapu6g00779 803 Pfam Protein of unknown function, DUF255 58 218 IPR004879 -
Lapu6g00779 803 Gene3D Glutaredoxin 56 228 - -
Lapu6g00779 803 Gene3D - 529 712 IPR012341 GO:0005975
Lapu6g00779 803 PANTHER SPERMATOGENESIS-ASSOCIATED PROTEIN 20 47 797 IPR024705 -
Lapu6g00779 803 FunFam spermatogenesis-associated protein 20 529 706 - -
Lapu6g00779 803 SUPERFAMILY Thioredoxin-like 57 185 IPR036249 -
Lapu6g00779 803 SUPERFAMILY Six-hairpin glycosidases 246 641 IPR008928 GO:0005975
Lapu6g00779 803 PIRSF UCP006402_thioredoxin 44 801 IPR024705 -
Lapu6g00779 803 FunFam spermatogenesis-associated protein 20 56 228 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00779 - - gmx:100777751 1441.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00779 6 8121135 8127710 Lapu6g00779 6 8121135 8127710 ECH