Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00775 ATGGACATGATCACAAGCATGGTGGCTGAAAAGCCTGTGGTGATATTCAGCAAGAGCACATGTTGCTTGAGCCACTCCATGACATCACTGATACGTAGCTTTGGAGCAAACCCCACTGTTCATGAGCTGGATCAGATAGCCAACGGCCAGCAGATTGAAAGTGCATTGCTTCAAATGGGGTGCCAACCAAGTGTTCCTGCTGTGTTCATAGGACAACGATTCATTGGTGGCTCTAAGAAAATCATGAGCCTGCATGTCAGAAATGAATTGATACCACTGCTCAAGAATGCTGGGAAGCCAGTGGTGATCTTCAGCAAGAGCACTTGTTGCATGAGCCACACGGTGAAGGCTCTGATATGCAGCTTTGGTGCCAGCGCTGCAGTTATTGAGGTTGACAAAATGGCAAGTGGCCAACAAGTAGAGAGTGCCCTGGTCCAGCTAGGTTGCCGCCCTAGTGTGCCTGCAGTGTTCATAGGACAACAATTCATAGGAGGTGCTGATGAAGTCATCAAACTCAATGTTCAAAACAAGCTCGCCCAATTGCTTCTCAAGGCTAAAGCCATATTTATTTGA 573 0.4747 MDMITSMVAEKPVVIFSKSTCCLSHSMTSLIRSFGANPTVHELDQIANGQQIESALLQMGCQPSVPAVFIGQRFIGGSKKIMSLHVRNELIPLLKNAGKPVVIFSKSTCCMSHTVKALICSFGASAAVIEVDKMASGQQVESALVQLGCRPSVPAVFIGQQFIGGADEVIKLNVQNKLAQLLLKAKAIFI* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00775 190 PANTHER GLUTAREDOXIN 1 98 IPR011905 -
Lapu6g00775 190 Gene3D Glutaredoxin 98 189 - -
Lapu6g00775 190 Gene3D Glutaredoxin 2 97 - -
Lapu6g00775 190 PRINTS Glutaredoxin signature 101 119 IPR014025 -
Lapu6g00775 190 PRINTS Glutaredoxin signature 160 173 IPR014025 -
Lapu6g00775 190 PRINTS Glutaredoxin signature 146 159 IPR014025 -
Lapu6g00775 190 ProSiteProfiles Glutaredoxin domain profile. 99 189 - -
Lapu6g00775 190 SUPERFAMILY Thioredoxin-like 2 98 IPR036249 -
Lapu6g00775 190 CDD GRX_GRXh_1_2_like 12 93 - -
Lapu6g00775 190 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Lapu6g00775 190 Pfam Glutaredoxin 13 75 IPR002109 -
Lapu6g00775 190 Pfam Glutaredoxin 101 163 IPR002109 -
Lapu6g00775 190 CDD GRX_GRXh_1_2_like 100 181 - -
Lapu6g00775 190 NCBIfam glutaredoxin-like family 98 189 IPR011905 -
Lapu6g00775 190 NCBIfam glutaredoxin-like family 5 98 IPR011905 -
Lapu6g00775 190 SUPERFAMILY Thioredoxin-like 99 187 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00775 Lapu-Chr6 8087733 8094378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00775 1 98 Miscellaneous Gene Families AT4G15690 52.041 2.76e-37 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00775 K03676 - gmx:100789514 189.889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00775 6 8087733 8094378 Lapu6g00775 6 8087733 8094378 ECH