Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00770 ATGAGCAGCCACCAGCCCAAGACCAACGTCGATGGAGTGCACACTGATGTCAAGGTGGTCGAGAGCCCTACTAAAGAAACACCCTATGATCTGTTGCTGCGCTTTCTTGCCCTCTCACTCACTCTAGTTGCCACCATCGTTGTTGCTGTCGACAATGAGACCAAAGTCATCTCCTATGCTGAAATGCAATTCAAAGCCAATGCTAAGTGGGAATATATGTCTGCTATGGTGTTTTTCGTGGTGTCAAACGCAATAGCGTGCTCATATGCAGCTGCGTCATTGGTGATAACAGTGATGGCAAGAAGCAGTGGATCGAGAAAAAACGATCTGACACATCTGGTGGTAACCGCTTTAGACCTTGTGTTGATGGCATTGTTGTTCTCAGCCAATGGTGCAGCTTGTGCAGTGGGAGTGATAGCACAGAAGGGTAACACGCACGTGCAGTGGATGAAAGTGTGCGACGTCTTTGACGCCTATTGCCGCCACGTGACAGCTGCATTGGTCCTCTCCATTATTGGCTCCACGGTGTTCCTCTTGCTGGTGCTGGATTCTGTTCTCAAACTCCATTACAGATCAAGAAGCTAG 585 0.4889 MSSHQPKTNVDGVHTDVKVVESPTKETPYDLLLRFLALSLTLVATIVVAVDNETKVISYAEMQFKANAKWEYMSAMVFFVVSNAIACSYAAASLVITVMARSSGSRKNDLTHLVVTALDLVLMALLFSANGAACAVGVIAQKGNTHVQWMKVCDVFDAYCRHVTAALVLSIIGSTVFLLLVLDSVLKLHYRSRS* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00770 194 Pfam Casparian strip membrane protein domain 29 174 IPR006702 -
Lapu6g00770 194 NCBIfam plant integral membrane protein TIGR01569 31 187 IPR006459 -
Lapu6g00770 194 PANTHER CASP-LIKE PROTEIN 1U1 22 189 IPR044173 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00770 Lapu-Chr6 8044208 8045543 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00770 - - gmx:100817307 300.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00770 6 8044208 8045543 Lapu6g00770 6 8044208 8045543 ECH