Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00760 ATGACAACTGATGTAATTTGCGAGTATGGACGAGTTGTTCTTGATAGTGAGGATGAAGAAATGAATGATAGACATTTTGGCAGGGAATTTCTTGAGGATGAAACCAGTCCAACAGTGAAAACTCCTTCGACTCTCTTCCAGAAAATACTGTCCAAGCCACCTCGTGAGCAAGTAGAAGCAAATGCCACCACTTTTGGGAACTCTGCTGCTGGCGACAAAAGAGCTTTAGTTGATTCTGACAGCTTTGCTGACAACAACCGTTTATATCCACCTGCAACGCTAAATCACATTCACTCACCAGAGCCTGGGGATTCAACCCAAGCTGCACTTGGTTTTGTGGATCAGTACTTGTCTTCGAATGATGTGGACTTGTTTCAAGGAATTCATTGTGGAAAGACCGCCAGGGAGAAATCATCTCATGTCCTGAATGCAAGAGGACCACTAAATCTTGCTAAGAAAATTAAAGCTCGAACTGAAAATGAAGATAAAGAACCTTTCAAATGGGTTGACAGTTGCCAACATGACAACAGAGGTCGTATGTTTGGTCAAAATATTGAAGCATCTTCAAATTTTAGAAGATACAAACAGAGATATACGAGAAGAAGGAGAAAAGGTGGCCATCTTCAGAGCCAAGGAAACTGTAGTACAAGTAATGGATGTGATGAGAAGTTTGGTCTAGGACCGAGAATGGCAATTGAAAATAGTAACTCTCTCAAGGAATTGAATGTTCAACCAAGTTCTACAAGAGAGAATGCTAATGTTTATTCCAGTGTAACACATATAGAGGACATGTCTGATATCGGTTTAGGCACTCAAATAGCTGCTGAAGCAATGAATGCCTTAGCTTTAATGCCCCCTTATGGATGCCAGTTCAATGATACCCATCAACCAGAGAATGCATTAGATGGCTCTTTGAGCGATTTGACGGAGAATGAAACTCATCTGAAAAGTTCTTCAAATATTCAGAATCCTAGTTTACATTGTATCTCAACAGAATCAAATAAGAAAAATGCATCCTCCTCTAGATTTAGTAAAATAACTTCTAGCTCATCTTGCAAGCACACTAACAAACAGGAGTCAAATGTTGTTAGTGGCAAAATGAAAAAAATGATGAAAAGCAAGTCAACTACCGAGGGCCGGTTTGAAAATAATAATAGTTTGCCAATATGCAGTAAACTTATATTGCTTGAAGAGGTTTGCCCACTGGGAGAATATTCAAATTTCCAACCTGCTGCCAAAGAATCCGAACACAGGAACAATGATAGTGGACATCCAAGAATCAAAGATCAACCAAGCCATCGTGCAGAGGAGAACAATAATGTCAAGGAGAAGGATATTAAACACAAGAGAAAGGGGACTGGTTTAGTGGCTGATCCAGTGAAGTTGGGTGCTAGGACTAAGCGTCTTAAATTCCTTACCAATTCATGTATACTTGCTAAGAAAGTCAGGTTGAATCATCTGACTGAAGTTAGCCCACAGTTATCTGCAACCTGCAGTTTTTCATGGACTGATTCTTGGGTTTATCCAAAGAGATCAAGAGGGAAAAGAAAGGGGGCCAATATGCGAAACAATCTCAATGCACCAACTGTTTTGTGTATTGATGGAAAAGAAAACAATGTCTTCTCCACTAAAAGTCTAGAGGACCAGGCCAATGCTTCATGTGTTGATAATGGCAGATGCTTGTTACAGCGGGACTTTGTGCCACCAGGCTCATCTGGTGATGCAATGAAGGTAGAAAACTTGCCTGATATGCACCCTTTATTGTTGGCACATGTTGAAAGGTCATCAAACAAAAGTGTTGCACAATCAAGATCAGAAATTCAACCTACTGTTATGGCAAGTGATGGTGTAAAAGTTTCAAATGTGAACCATTCATATACTGAGCATCACAAAAAGCTGTATGAAAAAACCCTGCCTAAGTCTTCACTTTTGAAAGAGCTTATCAGATTAGGGGTTCCTGAGTCCATGTCAGATATGATGTGGAAGGATCTGAGACATCGAAGAGATATGACAGATGTTCGAGTTCTGTTTAGTCAGCATTTGGATGACAGTATCATTAAGCAGCAAAAAAAGATATTGACACGTCTCAATATATCTGTTGCATCAAGTTCAATGGAGGCCACACATTTCGTAGCAGACAAATTTACACGCACAAAGAATATGTTGGAAGCCATGGCTCTTGGGAAATTAGTTGTGAATCACTTATGGCTTGAGAGCTGTGGACAAGCCAACTGTTTTATTGACGAGAAAAATTACATTCTGAGGGATATGAAAAAGGAAAAGGAAATAGGCTTCAACATGCCAGTTTCTCTTGCGCGCGCAAGACAAAAGCCACTCCTAAAGGGTAAAAGAGTCTACATCACGCCACATATTAAACCTGATAAGGAAGTGATTGCAAGTTTAGTCACAGCTGTTCATGGCCAGGTAGTAGATCAAAGTGAGGTGTGTGCTGCCATGAATGATAATATCTTAGATGATATGTTGATTCTTTCTTGTGAAGATGACTATGCAATATGCCGCCGTTTATTTAAGAAAGGAACTGCAGTTTACAGTTCAGAGCTTGTTCTGAATGGAATTGTAATCCAAAAATTGGAACTTGAGAGACATCAACTCTTCATGAATCATGTTACAAGGAGTAACAATTGCCCGAGTACATCTAATCGGTTTGGGAAGGTTTACAGAAGGCGTCGAGGTCTTTTTCCGGATCGTAGCTGA 2715 0.4004 MTTDVICEYGRVVLDSEDEEMNDRHFGREFLEDETSPTVKTPSTLFQKILSKPPREQVEANATTFGNSAAGDKRALVDSDSFADNNRLYPPATLNHIHSPEPGDSTQAALGFVDQYLSSNDVDLFQGIHCGKTAREKSSHVLNARGPLNLAKKIKARTENEDKEPFKWVDSCQHDNRGRMFGQNIEASSNFRRYKQRYTRRRRKGGHLQSQGNCSTSNGCDEKFGLGPRMAIENSNSLKELNVQPSSTRENANVYSSVTHIEDMSDIGLGTQIAAEAMNALALMPPYGCQFNDTHQPENALDGSLSDLTENETHLKSSSNIQNPSLHCISTESNKKNASSSRFSKITSSSSCKHTNKQESNVVSGKMKKMMKSKSTTEGRFENNNSLPICSKLILLEEVCPLGEYSNFQPAAKESEHRNNDSGHPRIKDQPSHRAEENNNVKEKDIKHKRKGTGLVADPVKLGARTKRLKFLTNSCILAKKVRLNHLTEVSPQLSATCSFSWTDSWVYPKRSRGKRKGANMRNNLNAPTVLCIDGKENNVFSTKSLEDQANASCVDNGRCLLQRDFVPPGSSGDAMKVENLPDMHPLLLAHVERSSNKSVAQSRSEIQPTVMASDGVKVSNVNHSYTEHHKKLYEKTLPKSSLLKELIRLGVPESMSDMMWKDLRHRRDMTDVRVLFSQHLDDSIIKQQKKILTRLNISVASSSMEATHFVADKFTRTKNMLEAMALGKLVVNHLWLESCGQANCFIDEKNYILRDMKKEKEIGFNMPVSLARARQKPLLKGKRVYITPHIKPDKEVIASLVTAVHGQVVDQSEVCAAMNDNILDDMLILSCEDDYAICRRLFKKGTAVYSSELVLNGIVIQKLELERHQLFMNHVTRSNNCPSTSNRFGKVYRRRRGLFPDRS* 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00760 904 MobiDBLite consensus disorder prediction 200 220 - -
Lapu6g00760 904 SUPERFAMILY BRCT domain 662 770 IPR036420 -
Lapu6g00760 904 Gene3D BRCT domain 661 777 IPR036420 -
Lapu6g00760 904 CDD BRCT_PAXIP1_rpt6_like 779 865 - -
Lapu6g00760 904 CDD BRCT_MDC1_rpt1 673 747 - -
Lapu6g00760 904 MobiDBLite consensus disorder prediction 311 368 - -
Lapu6g00760 904 PANTHER PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 51 871 - -
Lapu6g00760 904 MobiDBLite consensus disorder prediction 311 363 - -
Lapu6g00760 904 Gene3D BRCT domain 778 879 IPR036420 -
Lapu6g00760 904 MobiDBLite consensus disorder prediction 412 450 - -
Lapu6g00760 904 SMART BRCT_7 667 744 IPR001357 -
Lapu6g00760 904 ProSiteProfiles BRCT domain profile. 665 754 IPR001357 -
Lapu6g00760 904 Pfam Regulator of Ty1 transposition protein 107 BRCT domain 667 754 IPR001357 -
Lapu6g00760 904 MobiDBLite consensus disorder prediction 414 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00760 Lapu-Chr6 7953339 7957555 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00760 - K20780 gmx:102659913 1344.72