Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00744 ATGCTATTCCGACTCTCCAATTTCTTAACATCCAAATTCAATCAATCGCTCAACTCAAACCTAAGCGGTAACTATTCGGAAATGGCGGTTTCCGAAGAGGAATGCTCTTCGGCGAAGTCTGGTCCCTCTTCTTCTTCCTCCGCCTCACGCTACTACCTCTCCAAATGCGTTCTCAGAGGAAGTGTCGTTCTTCAGGTCCTCTACGCTCACATCCGTTCTCCCTCCTCAAATGACATCGTGTTCGGCAAGGAGACGTCTATTGAATTGGTGGTTATTGAGGATGATGGGAATATGCAATCTGTGTGTGATCAGCCTGTCTTTGGCACCATCAAAGATCTTGCCATATTGCCTTGGAACGAGAAGTTTCGTGCACGTGATCCACAGCTGTGGGGTAAAGACCTTTTGGTTGCTACATCTGATTCTGGGAAGCTGTCGTTGCTCACGTTTTGCAATGAAATGCACAGGTTTGTTTCTGTAACACATATTCAGATGTCTAATCCTGGAAACCCAATGGATCTTCCTGGAAGAAAGCTAGCTGTTGATTCCAGTGGTTGTTTTATCGCTTCCAGTGCATACGAAGATCGGCTGGCCTTGTTTTCAATGTCAATGTCCAGTGGTGATATCATCGATGAGAGAATTGTATATCCTTCTGAAAGTGAAGGAACTGCAAGTTCTTCCAGAAGCATCCAGAGAACCAGTATCCGTGGTACTATTTGGAGCATCTGCTTTATTTCACAAGATTCCAGACAATCAAGCAAGGAGCATAATCCTGTACTAGCTGTTATTATAAATAGGAGAGGAGCCCCTCAAAATGAATTGTTATTATTGGAATGGAATGTTAAAGCACACAAAATATTTGTTCTTTCTCAGTATGCTGAAGCTGGGCCTCTAGCATACGACCTTGTTGAAGTTCCTAACTCCGGGGGACTTGCATTTCTGTTCAGGACTGGTGATGTTCTCTTAATGGATCTTAGAGATCATTGCAACCCATCCTGTGTCTATAAGACTAACTTGAACATTTTACCAAATGCCATGGAAGAGCAGACTTATGTGGAAGACTCTTGTAAATTACATGATGTTGATGATGAACGCTTTAATGTTGCTGCCTGTGCTTTGTTGGAGCTGAGTGATTATGATCCTATGTGCATAGACAGTGACAATGGTGGTGCTAATTCAGGCTACAAATATGTATGCTCATGGAGTTGGGAACCCGAAAATAGTAGAGAGCCTAGGATGATCTTCTGTGTAGATACTGGGGAATTTTTTATGATTGAAGTTCTTCTTGATTCTGAGGGCCCTAAAGTTAATCTGTCTGAGTGCCTCTATAAAGGTCTACCGTGTAAAGCACTTTTGTGGGTTGAAGGTGGATATGTAGCTGCCCTTGTGGAAATGGGGGATGGTGTGGTCCTGAAATTGGAAGATGGAAGGCTATGCTATACAAACCCTATTCAAAACATTGCACCAATCTTGGATATGGCAGTTGTAGATTATCGTGATGAGAAGCATGATCAAATGTTTGCTTGCTGTGGTGTGGCTCCAGAGGGGTCATTAAGGATAATTCGAAATGGCATTAATGTGGAAAATCTACACAGGACTGCTTCTATATATCAAGGGGTAACTGGTACTTGGACTGTCCGAATGAAAGTTACTGATTCACATCATTCTTTTCTAGTTCTATCATTTGTCGAGGAAACCAGAATATTGTCTGTTGGCTTAAGTTTTACTGATGTGACTGATTCAGTTGGTTTCCAACCTAATGTCTGTACTTTGGCATGTGGCCTTGTGACTGATGGTTTACTCGTTCAGATCCACCAATCTACTGTTAAGCTTTGTTTGCCCACTAAAGCTGCTCATTCTGAAGGCATCCCTTTGCCCTCCCCTATTTGCACATCTTGGTCTCCAGACAATGTGAGTATCAGTTTGGGAGCAGTTGGACATAATTTCATAGTTGTGTCAACCTCTAACCCGTGTTTTCTGTTTATCCTTGGGGTTAGATTGCTATCAACTTATCAATATGAAATTTTTGAAATGCAACATTTGGTACTGCAGAATGAATTATCATGCATTTCCATCCCTGGACAAGAAATTGAGCAAAAACCATCAAATTCATCCATTTCACCAAATAACAGTATCTCTTCTTTCCAAAGTGGAGTAGACATCAATAAAACCTTTGTTATTGGTACACACAGGCCTTCTGTGGAAATTTGGTTTTTTGCACCGGGTGGAGGAATTACTGTAGTTGCTTGTGGGACAATTTCATTAACAAATACAATAGGGACTGCCATAAGTGGTTGTGTACCTCAAGATGTACGGCTTGTATTTGTTGATAAATATTATGTTCTTGCTGGATTGAGGAATGGAATGCTCCTTCGCTTTGAGTGGCCGGTGGAACCATGTCCTTCATCACCAATAAATATGGTGGATACTGCTTTATCTTCTATAAATTTGGTAAATTCTGCAAGCAATGCTTTTGAAAAGAGAAGTGACCTTCCTTCAACACTTCAATTGATTGCCATTCGACGGATTGGCATTACTCCAGTTTTCTTGGTGCCACTAGGTGACACACTGGATGCTGATATAATTGCTCTTAGTGATAGGCCTTGGTTGTTGCATAGTGCAAGACATAGCCTTTCCTATACTTCTATCTCATTTCAACCATCCACACATGTAACTCCTGTTTGCTCTGTTGAGTGTCCAAAAGGAATATTGTTTGTTGCAGAAAACAGTTTACATCTGGTGGAAATGGTTCACAGCAAGAGACTTAATATGCAGAAGTTTCATTTAGAGGGCACTCCACGGAAGGTCCTGTATCATGATGAAAGCAAAATGTTGCTTGTGATGAGGACTGAACTGAATTGTAGTACATGTTTGTCTGACATATGTTGTGTGGATCCCCTAAGTGGTTCAGTAGTGTCGTCTTTTAGACTTGAACTTGGAGAAACAGGAAAATCCATGGAATTAGTAAGAGTTGGAAGTGAGCAAGTGCTTGTTGTTGGAACTAGTCTGTCATCTGGTCCGGCCGTAATGCCCAGTGGTGAAGCTGAAAGTTGCAAGGGTCGTCTTCTTGTTCTCTGTCTTGTTCATGTGCAAAATTCAGATAGTGGTTCGATGACGTTTTGTTCGAAGGCAGGGTCATCATCTCAAAAATCTTCACTACTCCATGAAATTGTTTCATGTGCTCCTGAACAGTTATCTGGCAGTAGCCTTGGTAGCAGTCCGGATGATAATAGTTCTGATGGCATCAAACTTGATGAAAATGAAGTATGGCAGTTCCGATTGGCTTATGCAACGAAATGGCAAGGAGTGGTTTTTAAAATCTGTCCTTATCTTGATCGTTACTTCTTGGCATCTGCTGGCAATGCTTTCTATGTTTGTGGTTTCCCTAATGACAATCCTCAAAGAGTGAGAAGGTATGCTATGGGACGGACACACCACATGATAACATCTTTGAGTGCACATTTTACAAGAATTGCTGTTGGTGATTGTCGTGATGGTATCATATTGTTTTCTTATCATGAGGAAGCAAGAAAATTGGAGCAACTTTGCTGTGATCCATCGCGAAGGTTAGTTGCTGATTGCATTTTGATGGATGCTGATACCGCTGTTGTTTCAGATCGTAAAGGGGGCATTGCTATTTTATGTTCAAATCATTTGGAAGACAATGCAAGTACTGAATGCAACATGACACTAAGCTGTGCTTATTTCATGGGTGAGATAGCTTTGAGCGTCCAGAAGGGCTCATATTCATACAGACTTCCAGCTGATGATGTTTTGCAAGGCGGCAATGGCCCCAAGACAAATGTTGATTCACTACAAAATACTATTATTGCCAGTACCATGTTAGGAAGCATAATGATCTTCATCCCTTTATCAAGGGAAGAATACGAGCTATTAGAAGCAGTGCAAGAAAGACTTGTTGTCCATCAGTTAACCGCGCCTGTTCTAGGAAATGATCATAATGAGTTTCGCAGTCGTGAAATTCGGGGTGGAGTACCCAAGATACTTGATGGTGACGTGTTGACCCAGTTTCTGGAGCTGACAAGTATGCAGCAAAAGATGATTTTGTCTTCGGAGCCACCGGATATAGCAAAACCAAGTTTGAAGCCATTCCTGCCCTCCCATGTTTCTGTAAATCAGGTGGTTCAACTTCTTGAACGAGTCCATTATGCTCTGAACTAA 4179 0.4168 MLFRLSNFLTSKFNQSLNSNLSGNYSEMAVSEEECSSAKSGPSSSSSASRYYLSKCVLRGSVVLQVLYAHIRSPSSNDIVFGKETSIELVVIEDDGNMQSVCDQPVFGTIKDLAILPWNEKFRARDPQLWGKDLLVATSDSGKLSLLTFCNEMHRFVSVTHIQMSNPGNPMDLPGRKLAVDSSGCFIASSAYEDRLALFSMSMSSGDIIDERIVYPSESEGTASSSRSIQRTSIRGTIWSICFISQDSRQSSKEHNPVLAVIINRRGAPQNELLLLEWNVKAHKIFVLSQYAEAGPLAYDLVEVPNSGGLAFLFRTGDVLLMDLRDHCNPSCVYKTNLNILPNAMEEQTYVEDSCKLHDVDDERFNVAACALLELSDYDPMCIDSDNGGANSGYKYVCSWSWEPENSREPRMIFCVDTGEFFMIEVLLDSEGPKVNLSECLYKGLPCKALLWVEGGYVAALVEMGDGVVLKLEDGRLCYTNPIQNIAPILDMAVVDYRDEKHDQMFACCGVAPEGSLRIIRNGINVENLHRTASIYQGVTGTWTVRMKVTDSHHSFLVLSFVEETRILSVGLSFTDVTDSVGFQPNVCTLACGLVTDGLLVQIHQSTVKLCLPTKAAHSEGIPLPSPICTSWSPDNVSISLGAVGHNFIVVSTSNPCFLFILGVRLLSTYQYEIFEMQHLVLQNELSCISIPGQEIEQKPSNSSISPNNSISSFQSGVDINKTFVIGTHRPSVEIWFFAPGGGITVVACGTISLTNTIGTAISGCVPQDVRLVFVDKYYVLAGLRNGMLLRFEWPVEPCPSSPINMVDTALSSINLVNSASNAFEKRSDLPSTLQLIAIRRIGITPVFLVPLGDTLDADIIALSDRPWLLHSARHSLSYTSISFQPSTHVTPVCSVECPKGILFVAENSLHLVEMVHSKRLNMQKFHLEGTPRKVLYHDESKMLLVMRTELNCSTCLSDICCVDPLSGSVVSSFRLELGETGKSMELVRVGSEQVLVVGTSLSSGPAVMPSGEAESCKGRLLVLCLVHVQNSDSGSMTFCSKAGSSSQKSSLLHEIVSCAPEQLSGSSLGSSPDDNSSDGIKLDENEVWQFRLAYATKWQGVVFKICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRYAMGRTHHMITSLSAHFTRIAVGDCRDGIILFSYHEEARKLEQLCCDPSRRLVADCILMDADTAVVSDRKGGIAILCSNHLEDNASTECNMTLSCAYFMGEIALSVQKGSYSYRLPADDVLQGGNGPKTNVDSLQNTIIASTMLGSIMIFIPLSREEYELLEAVQERLVVHQLTAPVLGNDHNEFRSREIRGGVPKILDGDVLTQFLELTSMQQKMILSSEPPDIAKPSLKPFLPSHVSVNQVVQLLERVHYALN* 1393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00744 1392 PANTHER DNA REPAIR/RNA PROCESSING CPSF FAMILY 56 1356 - -
Lapu6g00744 1392 Pfam CPSF A subunit region 1090 1345 IPR004871 GO:0003676|GO:0005634
Lapu6g00744 1392 Gene3D - 524 920 IPR015943 GO:0005515
Lapu6g00744 1392 FunFam Cleavage and polyadenylation specificity factor (CPSF) A subunit protein 524 920 - -
Lapu6g00744 1392 Pfam Mono-functional DNA-alkylating methyl methanesulfonate N-term 133 691 IPR018846 -
Lapu6g00744 1392 Gene3D - 62 484 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00744 Lapu-Chr6 7809896 7822854 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00744 K12830 - gmx:100806799 2405.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00744 6 7809896 7822854 Lapu6g00744 6 7809896 7822854 ECH