Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00738 ATGATGCCTAAACCCATGAACGTTTTCACAACAAAGCCCTCACCTTTGAGTACCATGGTGCTGCTGCTGATCATCTGCATTCTGGGTTTCTACGCTCTGCATTTCCCTCACTCTTCTACACCTTCCTCCACCTCCCAAAACCTCTCTCACGTGGAAACCCTTTTTCTCTCCACTTCCTCAAACTCCACTATTTCTTCCTACCTCCGCGCCCTCACCGTTCACCCTCACCTCGCCGGAACAAAACCCGGCTCCGACATCGCTCACTACGTCCTCAACCACTTCACTTCATTGGGACTCAAGGCCCACACTGCGACCTACACCACGCTCCTCTCTTTCCCGGTGCGCTCCTCCCTCTCAGCGCATTTTAGCGAAGGCAACTCGGTGAGCCTCCACCTCACGGAGCCAGCCGCCGCGGGTGTGGTTCCAGCGTACCACGCGTACTCGCCGTCGGGTGCTGTGAACGCGCGCGCGGTGTTCGCGAACTACGGGAGGGAGAAGGACTACCGCGCGCTGGGCGCGATGGGAGTGAACGTGAGCGGGTGCGTCGTGGTGGTGCGGAAGGGCTGGGAGATGGGGCGAGGCGCGGTGGTGGAGAGAGCGGAGGCGCACGGGGCGGCGGCGGTGCTGGTTTACGGCGAGGGTGACACGTGGCGGAAGGGGTTTGAGAGGGGGCACGTGATGAGGGGAGGAATAGGGGACCCACTTACTCCTGGTTGGGCTGGGGTTGAGGGTGGTGAGACACTGGGATTGGAAGATAGTGAGGTTTTGAAAAGGTTCCCCAAAATTCCATCTATGCCCTTGTCAGCTGAGGTGGCTGACTCTATTTTGTCCTCTCTTGGGGGTGTTCCTGTGCCCCTTGAATGGAGGAGCACCCTAAGATCTAAGGTCAGGCATGTTGGTCCTGGTCCCACCATCCTCAATTTCACTTACCAGGGTGAAAAGAAGGTGGCCACCATTCAAAATGTTTTTGCTGTCATAAAGGGGTCAGAAGAACCTGATCGATATGTTCTGCTTGGGAACCATAGAGATGCATGGACGTATGGTGCTGTTGATCCCAGCAGTGGGACAGCTGCACTACTTGACATTGCTCGTCGGTTTTCTGTTCTATTGGGCTTGGGGTGGAAGCCAAGGAGGACAATAATTCTCTGCAGTTGGGATGCAGAGGAATTTGGAATGATAGGATCTACTGAATGGGTTGAACAAAACCTTATCAATCTGGGTTCCAAAGCTGTAGCATACCTTAATGTTGACTGTGCTGTTCAAGGCCCTGGTTTCTTTGTTGGTTCAACTCCTCAGCTAGACAGTCTTATTCTTGAGGTCACAAAAAAGGTCAAGGATCCTGATTCTGAGGGTGTATCACTATATGAGAATTGGGCTGCTGCTTCTGCTGGAAGCAATAATATTCAGAGGCTCAGTGGAGTTGATTCTGATTTTGCACCATTCGTGCAGCACGCAGGGGTTCCATCCATTGACATGTATTATGGAAGGGATTTTCCTGTCTATCACACTGCATTCGACTCCTATAACTGGATGGCAGAGTATGGAGATCCATTCTTCCACCGCCATGTTGCTGTTACGGGAGTTTGGGGGCTTCTGGCCCTTCACTTGGCTGGTGATCCCATTCTTCCTTTCAATTACGTTTCATATGCAAATGAGTTACAGCTGTACAAAAACATTTTGAGCAACTTGATAGACGATAAAATTTCTCTACATCCATTAACTCTTTCAATTGAAGAATTTGCTTCGGCTGCCAAAGAAGCTGATGATGAATTAAAGAAACTGAGATTGCAAGAAACAGGAGGGTATTTTGTAGATATGAAAAAGCGAGCATTGAATGATAGACTAATGCTTGCTGAAAAAGGGTTCTTGGATGCAGATGGACTTCAAGGAAGGCAGTGGTTCAAGCATCTCGTGTATGGGCCTTCAAGCTACCATGAAAGGCTCAATTTCTTCCCTGGGATTTCTGATTCTATTACTAGTTCTACGGGTGTAACTGGAAGAGAAAGGCTAGCATCAATTCAACATGAGATCTGGAGGGTTGCCAGAGCCATTCGTAGAGCTGCTTCTGCACTCAGAGGAGAATTCACTTAA 2091 0.5031 MMPKPMNVFTTKPSPLSTMVLLLIICILGFYALHFPHSSTPSSTSQNLSHVETLFLSTSSNSTISSYLRALTVHPHLAGTKPGSDIAHYVLNHFTSLGLKAHTATYTTLLSFPVRSSLSAHFSEGNSVSLHLTEPAAAGVVPAYHAYSPSGAVNARAVFANYGREKDYRALGAMGVNVSGCVVVVRKGWEMGRGAVVERAEAHGAAAVLVYGEGDTWRKGFERGHVMRGGIGDPLTPGWAGVEGGETLGLEDSEVLKRFPKIPSMPLSAEVADSILSSLGGVPVPLEWRSTLRSKVRHVGPGPTILNFTYQGEKKVATIQNVFAVIKGSEEPDRYVLLGNHRDAWTYGAVDPSSGTAALLDIARRFSVLLGLGWKPRRTIILCSWDAEEFGMIGSTEWVEQNLINLGSKAVAYLNVDCAVQGPGFFVGSTPQLDSLILEVTKKVKDPDSEGVSLYENWAAASAGSNNIQRLSGVDSDFAPFVQHAGVPSIDMYYGRDFPVYHTAFDSYNWMAEYGDPFFHRHVAVTGVWGLLALHLAGDPILPFNYVSYANELQLYKNILSNLIDDKISLHPLTLSIEEFASAAKEADDELKKLRLQETGGYFVDMKKRALNDRLMLAEKGFLDADGLQGRQWFKHLVYGPSSYHERLNFFPGISDSITSSTGVTGRERLASIQHEIWRVARAIRRAASALRGEFT* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00738 696 Gene3D Zn peptidases 62 543 - -
Lapu6g00738 696 Pfam Peptidase family M28 321 509 IPR007484 -
Lapu6g00738 696 SUPERFAMILY Transferrin receptor-like dimerisation domain 543 694 IPR036757 -
Lapu6g00738 696 Coils Coil 577 597 - -
Lapu6g00738 696 Gene3D - 546 696 IPR036757 -
Lapu6g00738 696 PANTHER N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE 19 693 IPR039373 -
Lapu6g00738 696 Pfam PA domain 155 215 IPR003137 -
Lapu6g00738 696 Gene3D - 116 312 - -
Lapu6g00738 696 SUPERFAMILY Zn-dependent exopeptidases 60 541 - -
Lapu6g00738 696 Pfam Transferrin receptor-like dimerisation domain 568 691 IPR007365 -
Lapu6g00738 696 SUPERFAMILY PA domain 109 323 IPR046450 -
Lapu6g00738 696 CDD M28_PSMA_like 317 544 - -
Lapu6g00738 696 FunFam Os01g0740650 protein 312 543 - -
Lapu6g00738 696 FunFam N-acetylated-alpha-linked acidic dipeptidase 2 544 694 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00738 Lapu-Chr6 7765873 7770737 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00738 K01301 - gmx:100798131 1243.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00738 6 7765873 7770737 Lapu6g00738 6 7765873 7770737 ECH