Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00732 ATGAAATTCGGGTGTGCATTTAGAGAGTACCTGCAGGAGGAGCGGGAGTGGTTCCTGGACGAGAAATGTGCTCACGTTGAATATATCAGGTTGAAGAAAGTGTTGAAGACTTGCCAGAAAGACACCTCTTCCGATAAGGACATGCTGTGTCAGTGTCAGTCTTGCCCACTATGTGATCAACAGTTCTTCTCTGAGTTGATGAAGGAAGCTTCAGATGTGGTAGGGTACTTTAGTTCAAGGGTTAAGCATCTCCTTCATCTTCACATTTCAACAGGACTACACAGATATGCGTTGCGTTTGCGCCAGTGCTTTAAAAGTGATAGGCAAGCCCTTACTCAAGAAGGGAGGATTTTAATTGAGTACATTGCAATGAATGCTATTGCAATGAGGAAAATACTCAAGAAATATGATAAAGTACACAGCTCTGTGAATGGGGAGAACTTCAAATCTAGGATGCACGCTGAACACATTGAACTTTTGCACTCTCCTTGGATAATTGAATTGGGTGCTTTTTATCTGAATTCTAGTGGACTAGATAGTTGTGAGCTTGATGGAGTCTATGGTCACTTTTCATGTGAGCTAAACATAAATAAAGATGTAATGACATTGGTTCTTCCCGATTCTATTAAGCTCGAGTATGCTCTAACTTGTGCAATTTGCCTGGATTTTGTTTTCAACCCTTATGCTTTGAGTTGTGGTCATATCTTCTGCAAGTCATGTGCTTGCTCAGCTGCCTCTGTGATGATTTTTCAAGGCCTTAAAGCTGCCAGTCCAGAGTCGAAGTGTCCTATATGCAGAGAGGTTGGAGTTTATTCTAAGGCTGTGCGTATGCTAGAACTTGATCTACTTATGAAAAGAAGGTGCAAAGATTACTGGAGAGAGAGGCTAGCTAGCGACCGAGTTGATACATTGAAGCAATCCAAGGAATACTGGAATTTACAGTCCACATATGCAATTGGATTGCTCATGTCAAATTTCTCGTCATGGTTCTTTCGCTTACGTTCTTCTTCCTCCAAGTTCTTCTACTGCTACCGCACTCTCCACAATAAATACGCACCCACCGTCTTCAACAGCCACTCTACCAAGAACGCACGCTCAACCTCTCTTCTTCCTCTCGCTCTCGCTCTTTCCGCTGGATCACTCGCTCTTCATCCACACTTCACTCCTTCCTTCTGCGACACCGACAGAGGTGTAAATATTGGGGGCAAAGGTAGCACGCAATACGTTGTTAAGGGATCACAGAAGGAATTTCCGCGGGAGCTTCTTGAGGAGTTGAAAATCATCTGTCAGGATAACATATCAGTTGATTATGATGAAAGATATATCCATGGAAAACCACAAAACAGCTTTCACAAGGCTGTTAATATCCCAGATGTGATTGTTTATCCGAGATCTGAAGAGGAGGTATCTAAGATTGTCAGCTTATGTAACATTCATAAGGTTCCTATTGTACCTTATGGTGGAGCTACATCAATTGAGGGTCACACCTTATCCCCTCACGGAGGGGTTTGCATTGACATGTCATTAATGAAAAGAGTGAAAGCATTGCATGTTGATGACATGGATGTTGTTGTTGAGCCTGGCATTGGATGGATGGAGCTTAACGAGTATTTGGAACCTTATGGACTATTTTTTCCACTTGATCCGGGACCTGGTGCTAGCATTGGAGGCATGTGTGCTACACGTTGCTCTGGTTCATTAGCTGTGAGGTATGGAACTATGCGTGATAATGTCATCAGTCTCAAGGTGGTTCTTGCCGATGGAGGCATTGTGAAGACTGCGTCACGAGCCAGGAAGAGTGCAGCAGGGTATGATTTGACTCGCTTGATGATTGGAAGTGAAGGAACACTTGGTGTCATAACAGAAGTAACCCTGAGGCTTCAGAAAATTCCCCAGTATTCAGTGGTTGCAATGTGCAATTTCCCTTCTGTGAAGGATGCAGCAGATGTTGCTATTGCCACAATGAAGTCTGGTGTACAGGTGTCAAGGGTAGAGCTATTGGATGAAGTTCAAGTGAAAGCTATCAATATTGCTAATGGGAAAAATTTACCTGAATATCCAACCTTAATGTTTGAATTTATAGGAACAGAGGCATATGCACTTGAGCAAACACAAATTGTTCGGAAACTTGTTTCTGAGCACAATGGCTCAGATTTTGTATTCGCAGAAGAACCTGAAGCAAAAAAGGAGCTTTGGAAGGTAAGGAAAGAGGCACTCTGGGCTTGCTTTGCAATGGAACCTAATCTGGAGGCAATGATTTCAGATGTATGTGTTCCTTTATCTCACCTTGGTGATTTAATTTCAAGGTCTAAAAAGGAGCTGGATGCATCACCACTAGTTTGCACAGTAATTGCGCATGCTGGTGATGGTAATTTCCACACGGTTATTCTATTTGATCCTAGCCAAGAAGAACAGCGACGGGAGGCAGAGAGACTCAACCAATTTATGGTTCATGCTGCCTTGTCATTAGAAGGAACTTGTACCGGTGAACACGGTGTTGGCACTGGAAAAATGAAGTATCTTGAAGAAGAACTCGGAGTGGAAGCATTGAGGACAATGAAAAAAATAAAAGCAGTCCTGGATCCCAACAATATCATGAATCCAGGAAAGCTCATTCCTCCCCATGTTTGTTTCTAG 2637 0.4289 MKFGCAFREYLQEEREWFLDEKCAHVEYIRLKKVLKTCQKDTSSDKDMLCQCQSCPLCDQQFFSELMKEASDVVGYFSSRVKHLLHLHISTGLHRYALRLRQCFKSDRQALTQEGRILIEYIAMNAIAMRKILKKYDKVHSSVNGENFKSRMHAEHIELLHSPWIIELGAFYLNSSGLDSCELDGVYGHFSCELNINKDVMTLVLPDSIKLEYALTCAICLDFVFNPYALSCGHIFCKSCACSAASVMIFQGLKAASPESKCPICREVGVYSKAVRMLELDLLMKRRCKDYWRERLASDRVDTLKQSKEYWNLQSTYAIGLLMSNFSSWFFRLRSSSSKFFYCYRTLHNKYAPTVFNSHSTKNARSTSLLPLALALSAGSLALHPHFTPSFCDTDRGVNIGGKGSTQYVVKGSQKEFPRELLEELKIICQDNISVDYDERYIHGKPQNSFHKAVNIPDVIVYPRSEEEVSKIVSLCNIHKVPIVPYGGATSIEGHTLSPHGGVCIDMSLMKRVKALHVDDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGPGASIGGMCATRCSGSLAVRYGTMRDNVISLKVVLADGGIVKTASRARKSAAGYDLTRLMIGSEGTLGVITEVTLRLQKIPQYSVVAMCNFPSVKDAADVAIATMKSGVQVSRVELLDEVQVKAINIANGKNLPEYPTLMFEFIGTEAYALEQTQIVRKLVSEHNGSDFVFAEEPEAKKELWKVRKEALWACFAMEPNLEAMISDVCVPLSHLGDLISRSKKELDASPLVCTVIAHAGDGNFHTVILFDPSQEEQRREAERLNQFMVHAALSLEGTCTGEHGVGTGKMKYLEEELGVEALRTMKKIKAVLDPNNIMNPGKLIPPHVCF* 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00732 878 Gene3D - 832 872 IPR016171 -
Lapu6g00732 878 FunFam D-lactate dehydrogenase mitochondrial 832 872 - -
Lapu6g00732 878 CDD RING-HC_BAH1-like 207 280 - -
Lapu6g00732 878 SMART ring_2 217 265 IPR001841 -
Lapu6g00732 878 Pfam FAD linked oxidases, C-terminal domain 630 871 IPR004113 GO:0003824|GO:0050660
Lapu6g00732 878 Pfam RING-type zinc-finger 217 263 IPR027370 -
Lapu6g00732 878 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 198 316 IPR013083 -
Lapu6g00732 878 PANTHER D-LACTATE DEHYDROGENASE 395 874 - -
Lapu6g00732 878 ProSiteProfiles PCMH-type FAD-binding domain profile. 453 630 IPR016166 GO:0071949
Lapu6g00732 878 Gene3D - 415 650 IPR016169 -
Lapu6g00732 878 SUPERFAMILY RING/U-box 209 268 - -
Lapu6g00732 878 ProSitePatterns Zinc finger RING-type signature. 232 241 IPR017907 -
Lapu6g00732 878 ProSiteProfiles Zinc finger RING-type profile. 217 266 IPR001841 -
Lapu6g00732 878 Pfam FAD binding domain 457 593 IPR006094 GO:0050660
Lapu6g00732 878 SUPERFAMILY FAD-linked oxidases, C-terminal domain 634 874 IPR016164 GO:0003824|GO:0050660
Lapu6g00732 878 Gene3D - 750 831 - -
Lapu6g00732 878 CDD SPX_BAH1-like 2 145 - -
Lapu6g00732 878 SUPERFAMILY FAD-binding/transporter-associated domain-like 425 631 IPR036318 GO:0050660
Lapu6g00732 878 FunFam D-lactate dehydrogenase mitochondrial 750 831 - -
Lapu6g00732 878 FunFam D-lactate dehydrogenase [cytochrome], mitochondrial 419 650 - -
Lapu6g00732 878 ProSiteProfiles SPX domain profile. 1 150 IPR004331 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00732 Lapu-Chr6 7710529 7726044 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00732 K00102 - gmx:100803612 994.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00732 6 7710529 7726044 Lapu6g00732 6 7710529 7726044 ECH