Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00725 ATGGATCCCTCTTCCATCTGTGGCGTCTCCCACTTCTTCACCCTCTTCCTTCTCTTCCTTCTACCACTCCATTCCCTCTCCGCATTCCCCCACAACTCCTCACCCACCCCTCAGATTAACTCCAACTCCATCCTCGTCGCGCTTCTTGACTCCCATTACACTGAACTCGCTGAGCTCGTCGAGAAAGCTCTTCTTCTCCAGCACCTTGAAGACGCCGTCGGCAACCACAACATCACCATCTTCGCTCCCCAGAACAAGGCCCTCGAACGCGACCTCGACCCCGAGTTCAAGCGCTTCCTCCTCGAGCCTCGCAATCTCCGCTCCCTGCAGACACTCCTAATGTCCCACATTCTCCCCACGCGAATCTCCTCTCGCCACTGGCCCGCCGCCGACCGCCGCCACGCCACCCTCGGAAACCACCACCACCTGCATTTAGCCAGCAATCCCTCCGGCCAGAAGACCGTCGACGCCGCCGAGATCATCCACGCCGACGATGTCGTCCGCCCCGACGGCGTCATCCACGGAATCGAGCGCCTCATAGTCCCCCGATCTGTACAGGAGGACTTTAACCGCCGCCGCAACCTCGCCGCCATCTCCGCGGTCCTCCCGGAGGGCGCGCCGGAGGTCGATCCCCGCACCCACCGCCTCAAGAAGCCCGCCCCCGTCCCCGCCGGAGCCCCGCCCGTTCTCCCAATCTACGACGCCTTGGCGCCGGGACCGTCCATCGCGCCTGCGCCGGCGCCTGGACCAGGAGGCCCGAAGCACCACTTCAATGGCGAGCGCCAGGTGAAGGACTTCATCCACACGCTCTTGCATTACGGAGGGTACAACGAAATGGCCGATATTCTCGTTAACCTAACGTCTCTCGCCACCGAAATGGGAAGGTTGGTTTCGGAGGGTTACATTCTGACCGTTTTGGCCCCAAACGACGAAGCCATGGCGAAGTTAACGACGGATCAGTTGAGCGAACCGGGCGCACCGGAACAGATTATGTACTATCACATTATTCCCGAGTACCAAACCGAAGAGAGTATGTACAATGCCGTTAGAAGGTTCGGTAAGGTCCGGTACGATACCCTCCGGTTACCCCATAAGGTTCTCGCTCAGGAGTCTGACGGTTCCGTTAAATTCGGTCACGGCGATTCCTCCGCTTACTTGTTCGATCCTGATATTTACACCGACGGAAGGATCTCCGTCCAGGGTATCGACGGCGTTCTTATTCCCCCGGAGGAAGAGGAAGAACGCACTCGCCGCACCACTCCACTTGTCAAGGTTGCCGCTAAACCAAGGAGAGGGAAGTTGATGGAAATGGCCTGTAGCATGCTTGGAGCTTTTGGACAAGTGTGCCAATGA 1353 0.5891 MDPSSICGVSHFFTLFLLFLLPLHSLSAFPHNSSPTPQINSNSILVALLDSHYTELAELVEKALLLQHLEDAVGNHNITIFAPQNKALERDLDPEFKRFLLEPRNLRSLQTLLMSHILPTRISSRHWPAADRRHATLGNHHHLHLASNPSGQKTVDAAEIIHADDVVRPDGVIHGIERLIVPRSVQEDFNRRRNLAAISAVLPEGAPEVDPRTHRLKKPAPVPAGAPPVLPIYDALAPGPSIAPAPAPGPGGPKHHFNGERQVKDFIHTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYILTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHIIPEYQTEESMYNAVRRFGKVRYDTLRLPHKVLAQESDGSVKFGHGDSSAYLFDPDIYTDGRISVQGIDGVLIPPEEEEERTRRTTPLVKVAAKPRRGKLMEMACSMLGAFGQVCQ* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00725 450 SUPERFAMILY FAS1 domain 34 183 IPR036378 -
Lapu6g00725 450 SUPERFAMILY FAS1 domain 242 410 IPR036378 -
Lapu6g00725 450 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 8 450 IPR044654 -
Lapu6g00725 450 Pfam Fasciclin domain 52 182 IPR000782 -
Lapu6g00725 450 Pfam Fasciclin domain 298 408 IPR000782 -
Lapu6g00725 450 ProSiteProfiles FAS1/BIgH3 domain profile. 40 180 IPR000782 -
Lapu6g00725 450 SMART fasc_3 304 409 IPR000782 -
Lapu6g00725 450 SMART fasc_3 79 183 IPR000782 -
Lapu6g00725 450 Gene3D FAS1 domain 283 409 IPR036378 -
Lapu6g00725 450 ProSiteProfiles FAS1/BIgH3 domain profile. 263 406 IPR000782 -
Lapu6g00725 450 Gene3D FAS1 domain 44 182 IPR036378 -
Lapu6g00725 450 FunFam Fasciclin-like arabinogalactan protein 16 258 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00725 Lapu-Chr6 7615870 7619033 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00725 - - gmx:100818575 743.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00725 6 7615870 7619033 Lapu6g00725 6 7615870 7619033 ECH