Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00709 ATGGCGACGATGGATCCGTTGATGACGCCGCTGGGGCAAATGCTATTAGAGGAGATCACTCCGGTGGTGATGCTCCTTTCAACTCCTTCCGTTGAAGAAGCTTCCCTGAAGAACGGCCTCTCCTTCCTCCAGACGCTAACGCCGTTTTGCTCCTTCGACAACATCGACGTGCCTGTTAGGACCGCTAGTGACCAACCCTATCGCCTTCACAAGTTCAAACTGCGCTTGTTCTACGCTTCCGATGTTAGGAGGCCCGATTTGAAGGTAGCTAAAGAGCAATTGAAGCAAGTTATCACGGAGGCAGGGGAGAAAGAGTTTTCTAAGTCGTGTTCAGATTTGCCGGAAATTAATCATGAACTTTCGTCGAGTTCTGAATACCAAAATACACCATCCTGGTTTCGGTTTCTCAATAAAGAGCTTGTTCGTGTGGCTTCCTTTTCAGACCATGAAGCTTTTGACCATCCTGTGATATGTCTTCTAGCTGTCTCTTCTAAGGATGAGCAACCTATTAATAAATTTGTTGACTTTTTTAATTCCAACAAGCTTCCTTCCCTTCTTAATGATGGTGCAATGGATCCAAAAATTTCAAAGCACTACTTGTTAGTGCATGATAATCAAGATGGTCCTGCAGACAGAGCAAGTAAAATATTGACAGAAATGAGGAGTACATTTGGTACAAGTGACTGTTCGTTGCTTTGTATTAATTCTTCCCTGGATGCGCCAATCAAACATCAAGATAATCCTTGGGCTTCATATATAATTGATGCCTCATCTACTCCCACTCAAGATCTTGGTTGCTTTCTTAACATGGATGATATCGATGAGATTAAGGTTCTAATGCAAGATTTATCATCTAAGCACATCATTCCAAATATGGAGCAAAAAATTCGAATACTCAACCAACAGGTTTCCGCAACACGGAAAGGCTTTAAAAACCAAATAAAAAATTTATGGTGGAGAAAAGGGAAAGAAGATGGTGCAGATTCTCTCAATGGTCCTGCGTATAACTTTAATTCCATTGAATCCCAGATTCGAGTTTTGGGTGATTATGCTTTCATGTTACGAGATTATGAACTTGCCTTGTCAAATTATCGCCTAATTTCCACAGATTACAAGATTGATAAAGCCTGGAAGCGCTATGCTGGTGTGCAGGAAATGATGGGACTTACTTACTTCATATTGGATCAATCAAGAAAGGAAGCTGAGTATTGCATGGAAAACGCTTTTAACACATATTTAAAGCTTGGATCATTGGGTCAGCTAAATGCAACGCGATGTGGTCTGTGGTGGATAGAAATGTTAAAGGCACGCGATCAATATAAGGAGGCAGCTACTGTTTATTTTCGTATTTGTGGTGAGGATATCCTACATTCTGCCGTGATGCTTGAACAAGCATCATACTGCTACTTGTTGTCTAAACCCTCCATGTTACGCAAATATGGATTTCATCTAGTGCTTTCTGGTGAGCAGTATAAAAAGTGTGATCAGATTAAACATGCAATTCGAACATACAGAAATGCTCTTTCTGTTTTTAGAGGAACTACTTGGAGTTATATCAATGATCATGTTCATTTCCATATAGGACAGTGGTATGCTTCTCTTGGGATGTATGACGTGGCTGTCAAGCATATGATGGAAATCTTGTCCTGTAGCCATCAGTCCAAGACAACACAGGAATTATTCCTAGGCGACTTTCTTCAAATTGTGGAGAAAACTGGACGGACGTTTGAGGTAACAAAACTTCAATTGCCTGTAATCAACATCTCTACACTCAGGGTCATCTACGAAGATTACCGGACGTTTGGATCCCCTTCAGCTGCTAACACTAGAGAAGCCTCGTGGCGTTCTTTGGAGGAAGAAATGCTTCCATCATTCTCCGCCGCCAAGACTAATTGGTTGGAGTTGCAATCAAAGCTTATCTTTAAGAAGCACAGTCAAAATGTTTGTGTTGCAGGAGAAGCTGTGAAGGTGACTATTGAATTTAAAAATCCTCTGCAAATCTCAATTCCCATATCTAGTGTTAAACTCGTATGCAAGTATTCTGCCAGTACTGATGAAGTTGTATCAAATGAAAATGAGTCAAGTATGGACAAAGATACTGAGGTTGACCACTTTAGGGATATGAGCTCGGACAATTCCTCATTTATGGTGTCTGAGGTTGATTTCTTACTAGGAGGTGGTGAAACAACCATGATTCAACTATCAGTTACTCCCAGGCAAGAGGGTACTCTTGAAATTCTTGGTGTTCGGTGGAAACTTTCGGGGACAATTGTGGGCTTTTACAACTTTGAGTTGGGTCACCCAAAGAAGAATATTTTAAAAGGAAGGAAAACAAATCACCTGCCAAATGAGAAGTTTAAATTTATGGTGATCAAGAGCATACCCAAGCTTCAGGGTTCCATCCACCCTTTACCTGGAAAGGCATATGCTGGAGATTTAAGGCAACTTGTTTTGGAATTGAGGAATCCATCGGAGTTTCCTGTTAAGAATCTGAAGATGAAGATAAGTCATCCTAGGTTCCTTATAATTGGGAAGCAGGAAAATATGAAGTCAGAGTTTCCTGCGTGTTTAAGAAAGAAGACAGATTCAGTACAAAGTGATGTGCATGCTAATCCTAATATCACGTCTGACACAGTCTTTTTGTTTCCAGAGGGTACATCAGTTCAAGGTGAAACACCCTTCTTGTGGCCTCTTTGGTTTAGGGCTGCTGTTCCAGGTGATATATCTCTTTGCATGAGCATATATTATGAGATTGTAGATGTATCAAGTATCATCAAGTATCGTACTCTTCGCTTGCATTACAATGTGCAGGTTTTACCATCATTGGATGTCTCGTTTCAAATCTGTCCTTTTCGATCAAGATTAGATGAATTTCTAGTTCGATTGGATGTTGTTAATAAGACTAGCTCAGAAAGTTTCCAAGTTTGTCAGTTGTCATCAGTTGGTCACCAATGGGAAGTCTCATTAGTTCAAGCTCCGGATACCATTTTTCCTTCACAATCATTAATGGCCGGTCAAGCAATATCGTGTTTCTTTACACTGAAGAAATCAAGGAGGCTTTCAACATTGGGAGACGACATGTCTACATTGCCTGTCAGAAGTGATGTAAGATTGGTACCCCAAAGCATTGAGGATATAGTTTATGATATAAACAGTGCACCTTTGGTCAATTTCCATCGTTATGAAAGATTGCAGCAGGAAGTTTCATCCGAGGGTGGCTTAAATACTGTTGATTTTGTATTAATCTCTAGGCCATTCAAGAGTAGCGACGATCCTGGTTTTTCCAATCCTTCGTATGTGATGTCTCATCATGCGTGCCACTTCAATACTGCTAGCATGGGCCCTATTTCATGGCTAGTGGATGGACCTCAAACCATGCATCATGACTTCTCTGCATCGTTCTGTGAAATAAGTATGAAGATGCATATTCACAATTCATCTGGTGCCACTGCTTTTGTACGCATTGACACCTTAGATTCATCTGGTAATGGTGGACATACGACCAGTGTAAATGCGGTTCAATCTGCAACTACTGATAACCAAGCTGGGTGGCACGATATCACCCCAGTGAATGAACTCAAAGTGACATCAAATGCTCTTGAAACCCAACCAGGAAAGGCACTATCATTGGAAAGTGCCTCCTCATTTATATGGTCTGGATCAAGCTCAACCCATCTCCACATTGAGGCTATGTCCTCGGCAGAAATTCCTCTTCAGATCTGTGTATTTTCTCCTGGGACATATGACCTGTCAAATTATGTTTTGAATTGGAAACTTCCATCCAATGGACAGGGAGATAGTGATGAGAAGAGGCAGCATTCAGGCCAGTGCCAGGGGCATAAATACTATCTTACCGTGCTCCAGTCCACTTGA 3873 0.4121 MATMDPLMTPLGQMLLEEITPVVMLLSTPSVEEASLKNGLSFLQTLTPFCSFDNIDVPVRTASDQPYRLHKFKLRLFYASDVRRPDLKVAKEQLKQVITEAGEKEFSKSCSDLPEINHELSSSSEYQNTPSWFRFLNKELVRVASFSDHEAFDHPVICLLAVSSKDEQPINKFVDFFNSNKLPSLLNDGAMDPKISKHYLLVHDNQDGPADRASKILTEMRSTFGTSDCSLLCINSSLDAPIKHQDNPWASYIIDASSTPTQDLGCFLNMDDIDEIKVLMQDLSSKHIIPNMEQKIRILNQQVSATRKGFKNQIKNLWWRKGKEDGADSLNGPAYNFNSIESQIRVLGDYAFMLRDYELALSNYRLISTDYKIDKAWKRYAGVQEMMGLTYFILDQSRKEAEYCMENAFNTYLKLGSLGQLNATRCGLWWIEMLKARDQYKEAATVYFRICGEDILHSAVMLEQASYCYLLSKPSMLRKYGFHLVLSGEQYKKCDQIKHAIRTYRNALSVFRGTTWSYINDHVHFHIGQWYASLGMYDVAVKHMMEILSCSHQSKTTQELFLGDFLQIVEKTGRTFEVTKLQLPVINISTLRVIYEDYRTFGSPSAANTREASWRSLEEEMLPSFSAAKTNWLELQSKLIFKKHSQNVCVAGEAVKVTIEFKNPLQISIPISSVKLVCKYSASTDEVVSNENESSMDKDTEVDHFRDMSSDNSSFMVSEVDFLLGGGETTMIQLSVTPRQEGTLEILGVRWKLSGTIVGFYNFELGHPKKNILKGRKTNHLPNEKFKFMVIKSIPKLQGSIHPLPGKAYAGDLRQLVLELRNPSEFPVKNLKMKISHPRFLIIGKQENMKSEFPACLRKKTDSVQSDVHANPNITSDTVFLFPEGTSVQGETPFLWPLWFRAAVPGDISLCMSIYYEIVDVSSIIKYRTLRLHYNVQVLPSLDVSFQICPFRSRLDEFLVRLDVVNKTSSESFQVCQLSSVGHQWEVSLVQAPDTIFPSQSLMAGQAISCFFTLKKSRRLSTLGDDMSTLPVRSDVRLVPQSIEDIVYDINSAPLVNFHRYERLQQEVSSEGGLNTVDFVLISRPFKSSDDPGFSNPSYVMSHHACHFNTASMGPISWLVDGPQTMHHDFSASFCEISMKMHIHNSSGATAFVRIDTLDSSGNGGHTTSVNAVQSATTDNQAGWHDITPVNELKVTSNALETQPGKALSLESASSFIWSGSSSTHLHIEAMSSAEIPLQICVFSPGTYDLSNYVLNWKLPSNGQGDSDEKRQHSGQCQGHKYYLTVLQST* 1291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00709 1290 Pfam ER-Golgi trafficking TRAPP I complex 85 kDa subunit 171 524 IPR024420 -
Lapu6g00709 1290 Gene3D Tetratricopeptide repeat domain 328 559 IPR011990 GO:0005515
Lapu6g00709 1290 PANTHER TRANSPORT PROTEIN TRAPP 8 1289 IPR024420 -
Lapu6g00709 1290 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 644 833 IPR013935 -
Lapu6g00709 1290 SUPERFAMILY TPR-like 435 556 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00709 K20305 - gmx:100809666 2339.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00709 6 7468893 7487020 Lapu6g00709 6 7468893 7487020 ECH