Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00702 ATGGCGACGCATCCGCAAACTCCGACCTCATCGAACGCCTTCTCCTTCCTGTCGAAGGGCTGGCGCGAGGTTCGAGACTCAGCAGACGCGGATCTCCAACTCATGCGTGACCGAGCGAACTCCTTCAAGGACCTAGCCACGTCGTTCGACCGCGAGCTCGAGAACTTCTTCAATTCGGCGACGCCACCGTTCTCGGTGCCTGCCATGCGTTCTCCGCCTCCGAGGGAGATCGAGTTCGTCAAGAGTCTGCGCCCGAAGCTGTCGGAGATTCGGCGCGCCTACTCCTCACCCGAATTCAGCAAGAAGGTTCTGGAGAAATGGCGCCCGAGGTCGCGGATTCGAATCGACCTTTCTGCTATAAAGAACGCGATTGTGTCGGCGGAGGAGGATGGGATTGTGGATTTCGAGAAGAGGGGAAGGAGGTTGAGTTTCTGGGAGGAGTGGAAAAACGAAGGCGAGGGTGAATCTAAGGATTGGGAACCAATTCGTGCATTGAAGATCAGGCTCAAGGAGTTTGAAAAGCGCGGTTCTTCCTTCGAGGCTTTCAAGAACAGTGAATTCGTGGAGAAAGTCAAGTCTAGCTTGAAATCAATGTGCAAGGAACCTCAGGAGTCAAAGGAAGTGCCACCGTTGGATGTACCCGAACTTCTTGCCTACTTCGTAAAACAGTCTGGGCCATTTCTGGACCATCTTGGAGTGAAAAGAGACGTATGTGACAAGATAGTTGAAAGTTTGTATAGCAAACGCAGAAACCATCTTCTATTGCATTCCCTCTCTGGGGAAGAGTCTTCTATTGTTGGGAATGGAAACATAAATGATGAATTGGATTTACGAATAGCAAGTGTCCTTCAGAGCACAGGACACCGTCATGAAGGTGGATTCTGGTCAGACCATGCTAAGCATGATCTGTCCGAAAGCGAAAGACATGTTGCAATAGTCACAACTGCTAGTCTTCCTTGGATGACAGGAACAGCTGTAAACCCCCTATTTCGAGCTGCATATTTATCACAATCTGCAAAGCAGAAAGTCACTCTGCTGGTTCCATGGCTTTGTAAATCAGATCAAGAACTTGTTTATCCCAGCAGTCTCACTTTCACTTCACCAGAAGAACAGGAAGTTTATATACGTAGCTGGCTTGAAGAAAGGATTGGTTTTAAGGCAGACTTCAAAATTTCTTTTTATCCTGGGAAGTTTTCAAAAGAAAGACGTAGTATAATACCTGCTGGAGATACTTCTCAATTTATACCATCCAGGGATGCTGACATTGCTATCCTGGAAGAGCCGGAACATTTAAATTGGTATCATCATGGCAAACGTTGGACTGACAAATTCAACCATGTTGTTGGCATTGTCCACACAAATTACTTAGAATATATCAAGAGGGAGAAGAATGGGGCACTCCAGGCATTCTTTGTGAAACACATAAACAACTGGGTTGCAAGAGCATACTGCCACAAGGTTCTTCGTCTCTCAGCTGCTACTCAGGATTTACCTAAGTCTGTAATTTGCAATGTTCATGGTGTGAATCCGAAGTTCTTGAAAATTGGAGAAAAGATTGCTGCAGAGAGGGAGCTAGGGCAAAAATCCTTTACAAAAGGGGCGTATTTCTTGGGAAAGATGGTGTGGGCGAAGGGATATAAGGAGTTGATAGATTTATTAGCAAAGCACAAGGCTGACCTTGATGGCTTCAAGTTGGATGTGTTTGGAAATGGAGAGGATGCTAATGAAGTTCAGAGTGCAGCTAGAAAGTTAGATTTGAATCTCAGCTTTCAGAAAGGAAGAGATCATGCTGACGATTCTCTTCACGGGTACAAAGTTTTTATAAATCCTAGCATTAGTGATGTGCTATGCACAGCTACAGCTGAGGCACTTGCCATGGGAAAATTTGTAGTTTGTGCTGATCATCCATCAAACGAGTTCTTCAGGTCATTTCCCAACTGTTTGACGTACACGACTTCCGAAGACTTCGTGGCAAAAGTAAAAGAAGCATTAGAAAACGAGCCTTATCCTCTAACACCTGAGCAAAGATATCAACTTTCTTGGGAGGCCGCTACTCAAAGATTTATGGAATATTCTGAGCTTGACAGCATCCTGAATAAGGAAAATAATGGTGAAAAGTCAAGCCTAGATAAAAGAAAGCTCGGTGCTAAGTCAGTTTCAGTGCCTAATCTGACAGAACTAGTAGATGGAGGCTTAGCATTTGCTCACTATTGTCTCACTGGGAATGAATTCCTGAGATTATGCACAGGAGCAATACCTGGGACACGTGACTACGATAAGCAGCACTGTAAAGATCTTCATCTTTTGCCGCCACAGGTAGAAAATCCTATCTATGGCTGGTGA 2343 0.4533 MATHPQTPTSSNAFSFLSKGWREVRDSADADLQLMRDRANSFKDLATSFDRELENFFNSATPPFSVPAMRSPPPREIEFVKSLRPKLSEIRRAYSSPEFSKKVLEKWRPRSRIRIDLSAIKNAIVSAEEDGIVDFEKRGRRLSFWEEWKNEGEGESKDWEPIRALKIRLKEFEKRGSSFEAFKNSEFVEKVKSSLKSMCKEPQESKEVPPLDVPELLAYFVKQSGPFLDHLGVKRDVCDKIVESLYSKRRNHLLLHSLSGEESSIVGNGNINDELDLRIASVLQSTGHRHEGGFWSDHAKHDLSESERHVAIVTTASLPWMTGTAVNPLFRAAYLSQSAKQKVTLLVPWLCKSDQELVYPSSLTFTSPEEQEVYIRSWLEERIGFKADFKISFYPGKFSKERRSIIPAGDTSQFIPSRDADIAILEEPEHLNWYHHGKRWTDKFNHVVGIVHTNYLEYIKREKNGALQAFFVKHINNWVARAYCHKVLRLSAATQDLPKSVICNVHGVNPKFLKIGEKIAAERELGQKSFTKGAYFLGKMVWAKGYKELIDLLAKHKADLDGFKLDVFGNGEDANEVQSAARKLDLNLSFQKGRDHADDSLHGYKVFINPSISDVLCTATAEALAMGKFVVCADHPSNEFFRSFPNCLTYTTSEDFVAKVKEALENEPYPLTPEQRYQLSWEAATQRFMEYSELDSILNKENNGEKSSLDKRKLGAKSVSVPNLTELVDGGLAFAHYCLTGNEFLRLCTGAIPGTRDYDKQHCKDLHLLPPQVENPIYGW* 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00702 780 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 310 690 - -
Lapu6g00702 780 Gene3D Glycogen Phosphorylase B; 508 666 - -
Lapu6g00702 780 FunFam Digalactosyldiacylglycerol synthase 1, chloroplastic 508 666 - -
Lapu6g00702 780 CDD Glycosyltransferase_GTB-type 439 641 - -
Lapu6g00702 780 Gene3D Glycogen Phosphorylase B; 437 507 - -
Lapu6g00702 780 Pfam Glycosyl transferases group 1 534 669 IPR001296 GO:0016757
Lapu6g00702 780 PANTHER DIGALACTOSYLDIACYLGLYCEROL SYNTHASE 2, CHLOROPLASTIC 8 778 IPR044525 GO:0046481
Lapu6g00702 780 FunFam Digalactosyldiacylglycerol synthase 1, chloroplastic-like 397 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00702 Lapu-Chr6 7355495 7363425 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00702 12 602 Glycosyltransferase AT3G11670 69.408 0.0 838
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00702 K09480 - gmx:100796354 1495.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00702 6 7355495 7363425 Lapu6g00702 6 7355495 7363425 ECH