Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00692 ATGGAAGGCACCAAATCCAGGTTCAACAGGATTTGCGTCTTCTGTGGCAGCAGTTCAGGCAAAAAACCTACCTATCAAGAAGCTGCTGTTCAACTTGGCAGGGAGCTGGTGGAAAGAAGGATTGATTTGGTGTATGGAGGTGGCAGCGTGGGGCTGATGGGTCTCGTTTCTCAGGCAGTTCATGATGGTGGGCGCCATGTTCTAGGGGTTATCCCAACAAGTCTTATGCCAAGAGAGATAACAGGTGAACCCATTGGGGAAGTGAGAGCAGTATCTAATATGCACCAAAGGAAAGCTGAGATGGCTCGTCAAGCTGATGCCTTTATTGCCCTCCCAGGAGGATATGGAACCCTTGAAGAATTGCTGGAAGTCATTACATGGGCGCAGCTTGGGATCCACAGCAAACCCGTGGGGCTTTTGAATGTGGATGGATTTTACAATTCCTTGTTGTCTTTCATTGACAAGGCTGTTGATGAAGGCTTTATATCCCCAAAGGCACGACGCATTATCGTGTCAGCACCCACAGCCAAACAATTGATGCTAGAACTAGAGGAACATGTCCCTGAGCAAGATGAGTTTGTGTCCAAGTTGGTGTGGGAAGAAAGACTGAACTACGTGACTGAATCAGAAGTAACCATGTGA 642 0.4782 MEGTKSRFNRICVFCGSSSGKKPTYQEAAVQLGRELVERRIDLVYGGGSVGLMGLVSQAVHDGGRHVLGVIPTSLMPREITGEPIGEVRAVSNMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHSKPVGLLNVDGFYNSLLSFIDKAVDEGFISPKARRIIVSAPTAKQLMLELEEHVPEQDEFVSKLVWEERLNYVTESEVTM* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00692 213 Gene3D - 1 185 - -
Lapu6g00692 213 FunFam CASP-like protein 1 185 - -
Lapu6g00692 213 Pfam Possible lysine decarboxylase 53 180 IPR031100 -
Lapu6g00692 213 NCBIfam Rossman fold protein, TIGR00730 family 10 184 IPR005269 GO:0009691|GO:0016787
Lapu6g00692 213 SUPERFAMILY MCP/YpsA-like 7 180 - -
Lapu6g00692 213 PANTHER LOG FAMILY PROTEIN YJL055W 4 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00692 Lapu-Chr6 7234923 7239189 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00692 K22522 - gmx:100792663 403.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00692 6 7234923 7239189 Lapu6g00692 6 7234923 7239189 ECH
Lapu6g00692 6 7234923 7239189 Lapu7g00108 7 1137657 1141595 PCT