Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00685 ATGGCCCTATCCCGTGGATCCATCCTCACTCGATCAGTGTGGTCTTCCAATCTGGAATCGGAGTTCGAGTTAATCCGATCCGTCATCGATTCCTTCCCTCTCATCTCCATGGACACCGAGTTCCCCGGAGTCGTCGTGCGCCCCGACACCGGCGACCCCTCCTTCCGCCACCAACCCTCCGCGCACTACGCTGTCCTTAAAGCCAACGTCGACCGCCTCCACCTGATCCAGATCGGCCTCACTCTCTCCGATCAAGTGGGGAACCTTCCCACACTCGGCACCTCCAACGCCTTCGTCTGGGAGTTTAACTTCCGAGACTTCGACGTCTCGCGTGACGCCCATGCTCATGACTCCGTAGAGTTGCTACGGCGTCAGGGCATCGATTTTGAGAAGAATCGCGAGTTTGGTATCGATTCGGTCCGGTTCGCCGAGCTCATGATGTCCTCTGGTTTGGTCTGCGACGACGCAGTTAGTTGGGTGACGTTTCACAGCGCATATGATTTCGGATACCTGGTCAAATTGTTGACGCAGCGCACTCTGCCGGAGGAATTGGCAGAATTTCTTCGTCTGGTAAGGGTGTTTTTCGGTGACAGAGTCTTTGATGTGAAACACTTGATGAGGTTCTGCTCAAATCTTCATGGAGGTTTGGATCGAGTGTGCCAATCTCTGAATGTGGAACGAGTTGTAGGGAAAAGCCACCAGGCCGGTTCTGATAGCTTGCTGACTCTGCACGCTTTTCAGAATATTAGAGAGGTTTATTTTGGCAAGGCTGATGGACTTGTTCAGTATGCTGGTGTCTTGTATGGTTTGGAAGTTTTCTAA 822 0.5268 MALSRGSILTRSVWSSNLESEFELIRSVIDSFPLISMDTEFPGVVVRPDTGDPSFRHQPSAHYAVLKANVDRLHLIQIGLTLSDQVGNLPTLGTSNAFVWEFNFRDFDVSRDAHAHDSVELLRRQGIDFEKNREFGIDSVRFAELMMSSGLVCDDAVSWVTFHSAYDFGYLVKLLTQRTLPEELAEFLRLVRVFFGDRVFDVKHLMRFCSNLHGGLDRVCQSLNVERVVGKSHQAGSDSLLTLHAFQNIREVYFGKADGLVQYAGVLYGLEVF* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00685 273 Gene3D - 2 272 IPR036397 GO:0003676
Lapu6g00685 273 FunFam Putative CCR4-associated factor 1 7 1 273 - -
Lapu6g00685 273 SUPERFAMILY Ribonuclease H-like 11 270 IPR012337 -
Lapu6g00685 273 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 10 271 IPR039637 GO:0004535|GO:0030014
Lapu6g00685 273 Pfam CAF1 family ribonuclease 13 137 IPR006941 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00685 Lapu-Chr6 7158080 7159337 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00685 K12581 - gmx:100790027 501.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00685 6 7158080 7159337 Lapu6g00685 6 7158080 7159337 ECH