Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00682 ATGGGCAACGCTCAATCACCTTCCAACAATGATCCTCTATATGTTTCAGCAACTAGAGCTTTTACTCAAAAGGAACTTGAAGACTTGAGGTCTCTGTTCAATCATCTGGCAGCTCAATCCCAGACTAACGCCAAATGCATCTCTCCCTCCGTTTTTCAGTCATATTTTGGACTTCATGGACCTCTTGGGGAGAGGATGTTTGATTTAGTTACTCAAGAGCGCAAGGATCAAAGGTTAACCTTTGAGGACCTCGTTGTTGCTAAAGCTACTTATGAGAAAGGGACAAAAGATGAAGTTGAAGAATTCATCTATCGCTTATTAGATGTATCTGGAGATAATTTTGTAGCGAGGTCTGATTTGGAAACTGTTATGATTGCCATTTTTAACAATATATTATGCATAAAAGATTCTCAAGATAGATCAAGTTCACATGAGGATATTGTTAACATATTTCTGAATGCTGCAAAATTTTCAATGCGTAATGGAGGGGGCAGTGAGGAGACTATGTCTTTTGAAGATTTCAGAAACTGGTGTACTCATCTCCCATCTGTGAAGAAGCTTCTTGGAAGCCTACTTTTGCCACCTGGTTCAGGGCGACCTGGTTCTCAGATTCCTAAACTATTGACTTCAACGGGAATTGATTCTAGCATTATACTTTTAAGAAAGGAATATGCTTGGCATATTGGAGGTGCACTTTCTCAGCATGACCTGGAAGATTGGAATCTTTTGTATCATAGTTCTGTTAATGGTCTTAGTTTTAATACATTCTTGGGCAACATTTCAAATCATGCAGGCCCAACTGTGTTAATTATTAAGGACAAAGAGGGTTATATATATGGAGGATATGCTTCTCAACCATGGGAGCGACATGCTGATTTCTATGGAGACATGAAATGTTACCTTTTTCAACTAAATCCAGTGGCTTCTATATTCAGGCCGACTGGAGCAAACAATAATCTACAATGGTGTGCTATCAACTTCAGTTCAGAGGACATTCCAAATGGCATTGGTTTTGGGGGACGAGTCAATCACTTTGGTTTGTTTCTATCAGCAAACTTTGATCAAGGACATACATTTTCGTGTACCACGTTTGGTAGCCCTTGCCTCTCCAAGACTAACCGTATATTGCCAGAAGTAATAGAATGCTGGGGAGTGACTCAAGTTGCAACACAAGACAAGCATGATGCTGTGAAGGGCACTGTTCTGGAGAGGTTCAAGGAAGATCGCAATATGCTCAAAATGGTTGGGCTGGCAAATTCCAGCGAGTAG 1269 0.4043 MGNAQSPSNNDPLYVSATRAFTQKELEDLRSLFNHLAAQSQTNAKCISPSVFQSYFGLHGPLGERMFDLVTQERKDQRLTFEDLVVAKATYEKGTKDEVEEFIYRLLDVSGDNFVARSDLETVMIAIFNNILCIKDSQDRSSSHEDIVNIFLNAAKFSMRNGGGSEETMSFEDFRNWCTHLPSVKKLLGSLLLPPGSGRPGSQIPKLLTSTGIDSSIILLRKEYAWHIGGALSQHDLEDWNLLYHSSVNGLSFNTFLGNISNHAGPTVLIIKDKEGYIYGGYASQPWERHADFYGDMKCYLFQLNPVASIFRPTGANNNLQWCAINFSSEDIPNGIGFGGRVNHFGLFLSANFDQGHTFSCTTFGSPCLSKTNRILPEVIECWGVTQVATQDKHDAVKGTVLERFKEDRNMLKMVGLANSSE* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00682 422 Pfam TLD 242 385 IPR006571 -
Lapu6g00682 422 ProSiteProfiles TLDc domain profile. 218 386 IPR006571 -
Lapu6g00682 422 SUPERFAMILY EF-hand 7 191 IPR011992 -
Lapu6g00682 422 PANTHER NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED 134 386 - -
Lapu6g00682 422 SMART 109ultra 219 386 IPR006571 -
Lapu6g00682 422 ProSitePatterns EF-hand calcium-binding domain. 108 120 IPR018247 -
Lapu6g00682 422 Gene3D - 3 190 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00682 103 421 EF-hand Containing Proteins AT5G06260 61.491 4.09e-152 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00682 - - gmx:100788439 759.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00682 6 7100474 7105052 Lapu6g00682 6 7100474 7105052 ECH