Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00671 ATGTCTCAGACGAAGAAATTGACGCCGAATCTGGATCAGCAGAGCACAAAGGTGCTGAATCTAACGGTGCTACAAAGAATCGATCCATTCATCGACGAGATTCTCTTCACCGCCGCTCATGTCTCCTTCTACGACTTCAACATCGAAAGCAACCAGTGGAGTCGCAAGGATGTCGAAGGATCTCTCTTCGTTGTCAAGAGGAATTCACAACCACGGTTTCAGTTTATCGTAATGAATCGACGAAATACAGATAACCTTGTGGAGAATCTATTGGATTTTGAGTATGAACTTAAAAAGCCGTACCTATTATATCGGAATGCAGCTCAAGAAGTTAATGGTATATGGTTTTACAATCCAGACGAATGCGAGGAAGTTGCAAATCTTTTTAACAGGATACTTAATTTGTACCCAAAGGCACCTCCAACTACAACAACGCCTGCTAACAGAAGTGAGTTTGAGGAACACCAGCCAGTGTCAGTTATACCAGAAAGCTCTGTAGAATCGTCTTCAGCTGCTGCTTCTGCAACTGATGCTATTGAAGATCCTGTATTTACAAACTTCTTCAGCACATTGAAGACCACTGGAAATTATGCTTCTAGTGTAGAAAATGTTAGACAGCATTCTACGACTGTCACTTCCACTGCTCCTGGTGGTTTATTTTCTCCTGCACCTATTGTGCAAATACCTGCCTCTCATTCAACTTCATCTATATCGGGCTTCTCTGTTGACTCTCTTGAAACAGCCAAGAGTGGCAATCAAGCCATTAATCTTGTTAAGCCTTCTACTTTTTTCACATCCACTTCATCTTCACTGCTAGTTCCACCTATTTCTTCATCTGGGCTGCCTAGTGCAGTTGTTAATCATTCCCTGAATTTGCCACGACCATATGGCACTCCAGTACTTCAACCCTTCCCGCCCCCTAATCCTCCTCTCTCTCTTACCCCTATTTCAAGCTCTAGTCCAAATAGACCTGTAATCTGTAGGGATAGCGTTCGTGATGCACTTTTATCATTGGTTCAGGATGATCAATTCATCGACATGATGTTCCAGGCATTACAGAAGGTAAGTCTTTCATGA 1077 0.4271 MSQTKKLTPNLDQQSTKVLNLTVLQRIDPFIDEILFTAAHVSFYDFNIESNQWSRKDVEGSLFVVKRNSQPRFQFIVMNRRNTDNLVENLLDFEYELKKPYLLYRNAAQEVNGIWFYNPDECEEVANLFNRILNLYPKAPPTTTTPANRSEFEEHQPVSVIPESSVESSSAAASATDAIEDPVFTNFFSTLKTTGNYASSVENVRQHSTTVTSTAPGGLFSPAPIVQIPASHSTSSISGFSVDSLETAKSGNQAINLVKPSTFFTSTSSSLLVPPISSSGLPSAVVNHSLNLPRPYGTPVLQPFPPPNPPLSLTPISSSSPNRPVICRDSVRDALLSLVQDDQFIDMMFQALQKVSLS* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00671 358 Gene3D - 7 135 IPR011993 -
Lapu6g00671 358 PANTHER TRANSCRIPTION FACTOR SMIF DECAPPING ENZYME DCP1 10 354 IPR010334 GO:0000290|GO:0008047|GO:0043085
Lapu6g00671 358 Pfam Dcp1-like decapping family 17 130 IPR010334 GO:0000290|GO:0008047|GO:0043085
Lapu6g00671 358 FunFam mRNA-decapping enzyme-like protein 9 135 - -
Lapu6g00671 358 CDD EVH1-like_Dcp1 19 133 - -
Lapu6g00671 358 SUPERFAMILY PH domain-like 19 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00671 Lapu-Chr6 7000915 7005282 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00671 K12611 - gmx:100786833 524.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00671 6 7000915 7005282 Lapu6g00671 6 7000915 7005282 ECH