Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00659 TCATTTTTCGTGCTCGGCTTGAAAGTACAAAGAAGGGGGAACATTGCCTCCGAAGTTAGGTTTTGGTTTTGGCACTTTGGTAGAGTGAACCAATTTTTCTTTGCTACTGTGATCTCTCACCTCATCACCATGAGCAGATCAGGGCAACCACCGGATTTGAAGAAGTACATGGACAAGAAGCTTCAGATCAAGCTGAATGCTAATCGCATGATTGTTGGTACTCTTCGTGGCTTTGACCAGTTTATGAATTTAGTTGTTGACAACACTGTGGAAGTGAATGGCAATGAGAAAACTGACATAGGGATGGTGGTAATTAGAGGAAATAGTGTGGTCACTGTCGAGGCGCTTGAACCCGTGAACAGGACCTGA 369 0.4417 SFFVLGLKVQRRGNIASEVRFWFWHFGRVNQFFFATVISHLITMSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVVDNTVEVNGNEKTDIGMVVIRGNSVVTVEALEPVNRT* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00659 122 FunFam Small nuclear ribonucleoprotein G 44 119 - -
Lapu6g00659 122 Pfam LSM domain 52 114 IPR001163 -
Lapu6g00659 122 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN 46 121 IPR044641 -
Lapu6g00659 122 SUPERFAMILY Sm-like ribonucleoproteins 52 119 IPR010920 -
Lapu6g00659 122 CDD Sm_G 49 117 IPR034098 GO:0000387|GO:0005681
Lapu6g00659 122 SMART Sm3 51 115 IPR001163 -
Lapu6g00659 122 Gene3D - 41 121 - -
Lapu6g00659 122 ProSiteProfiles Sm domain profile. 48 119 IPR047575 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00659 Lapu-Chr6 6873873 6876517 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00659 K11099 - gmx:100305530 155.606
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00659 6 6873873 6876517 Lapu6g00659 6 6873873 6876517 ECH