Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00642 ATGGCTTCGAAGGCGATGGGCGTGGCAGCGGAGAAGATAGGGGCGGCAGCGCGCCGCCAAGCCGTGTCGTTGACGGACGCCGCAGCCTCGCGAATACGGCAGCTGCTACAGCAGCGTCAGAGGCCCTACTTGAAGCTCGGAGTCAAGGCTCGCGGCTGCAACGGCTTATCCTACACCCTCAATTACGCAGATGAAAAAGGAAGGTTTGATGAGTTGGTTGAGGATAAGGGTGTTAAGATATTGATTGATCCGAAGGCCCTTATGCATGTGATTGGAACTAAAATGGATTTTGTAGATGACAAACTGAGATCGGAATTTATTTTCGTCAATCCAAATTCTAAAGGTCAGTGTGGTTGTGGTGAATCTTTCATGACAACAAGCAGTAGTGGATCTTCTAAGTCATGA 405 0.4963 MASKAMGVAAEKIGAAARRQAVSLTDAAASRIRQLLQQRQRPYLKLGVKARGCNGLSYTLNYADEKGRFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFIFVNPNSKGQCGCGESFMTTSSSGSSKS* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00642 134 NCBIfam iron-sulfur cluster assembly accessory protein 22 124 IPR016092 GO:0016226|GO:0051536
Lapu6g00642 134 ProSitePatterns Hypothetical hesB/yadR/yfhF family signature. 106 123 IPR017870 -
Lapu6g00642 134 FunFam Iron-binding protein IscA 21 125 - -
Lapu6g00642 134 Gene3D - 21 127 IPR035903 -
Lapu6g00642 134 PANTHER IRON-SULFUR CLUSTER ASSEMBLY PROTEIN 16 125 - -
Lapu6g00642 134 SUPERFAMILY HesB-like domain 21 114 IPR035903 -
Lapu6g00642 134 Pfam Iron-sulphur cluster biosynthesis 22 121 IPR000361 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00642 K22063 - gmx:100777750 227.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00642 6 6744563 6748039 Lapu6g00642 6 6744563 6748039 ECH