Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00635 ATGTATTCCATCTCATGCTGTGTATCTTCCGCAACCCCATTATATAATTGGTTTTCTAAATTCAGAAGGGTTCCCTTCACCTCCAGCAACAAACTTCATGAATCAACAAGAGCACCCCAAAACCAGAAGAACATGATGGGAAAATGTGGAAAGTCTCTTACGGCGATCTCAATCCTCATGCACATCCTATGCCTCCTTTTGTTCCCACAACCCCTACTTTCTGAAGACAACAATTTCGTTCGTCAGCCAGCTGGTCAACTCATCATCACACCCCACCAACGCTCCCATTCTGATCCACAACAGGTGCACATTTCATTGGTGGGGAAAGAGAAGATGAGGGTGTCGTGGATAACGGAAGAGAAGCACGCAGAGTCTGTGGTGGAGTACGGAACAGAGGCAGGGGAATATAGCGCAAAATCAACGGGGGAACATACCTCGTACCAATATTTTTTGTACAATTCCGGCAAGATTCACAACGTTGTCATTGGTCCTTTGAAACCAGACACCACTTACTTCTACAGGTGTGGAGGGTCGGGCCCAGAGTTTTCTCTCAAGACACCTCCACATAACCTTCCTATTGAATTTGTCGTCGTTGGGGACTTGGGACAAACAGAATGGAGTGCATCAACCTTGAAACATGTTGAAAGTAGGGAGTACGACGTGGTATTGTTACCAGGAGATCTATCCTATGCAGACTCCCAACAGCCCTTGTGGGACTCCTTTGGTCGTTTAGTGGAACCATATGCTAGCAAAAGGCCATGGATGGTTACTGAAGGCAACCACGAGATTGAGATTTTCCCAATTATTTACCCACAGGGCTTCCAAGCCTACAATGCTCGTTGGCCTATGCCCTTCCAACAAAGTGCTTCCACCTCAAACCTCTATTACTCCTTCGAGGTTGTCGCCACACACGTCATCATGCTAGGTTCTTACGCTGACTTTCACGCCCAATCACAACAATACATGTGGCTTCAATCTGATCTCGCCAACATTGATAGGGTCAAGACACCTTGGGTGATTGTGTTGCTGCATGCACCTTGGTATAACACTAATCAGGCACACCAAGGGGAAGGTGAATCCATGAGACAAGCCATGGAACAATTGCTTTATAATGCTCGTGTTGACTTGGTTTTTGCTGGTCATGTTCATGCATATGAACGCTTCACTCGAATTTACGATAATAAGGTTGACTCATGTGGACCAATGTACGTCACAATTGGAGACGGAGGAAATCGAGAGGGACTTGCATTAATGTTTAAGAACCCTCCAAGCAGGCTCTCGTTGTATCGAGAACCAAGCTTCGGACATGGAAGGTTGAGAATACTAAATGAAACACATGCACATTGGTCGTGGCACCGAAACAACGACACTGATGCAGTTGTTGCTGATGGCGTTTGGATAGAGAGTTTAAGCAGCTCCGAATTCTGTTTGAAACAACAACCTAACGAAGAGCTGTAA 1458 0.4588 MYSISCCVSSATPLYNWFSKFRRVPFTSSNKLHESTRAPQNQKNMMGKCGKSLTAISILMHILCLLLFPQPLLSEDNNFVRQPAGQLIITPHQRSHSDPQQVHISLVGKEKMRVSWITEEKHAESVVEYGTEAGEYSAKSTGEHTSYQYFLYNSGKIHNVVIGPLKPDTTYFYRCGGSGPEFSLKTPPHNLPIEFVVVGDLGQTEWSASTLKHVESREYDVVLLPGDLSYADSQQPLWDSFGRLVEPYASKRPWMVTEGNHEIEIFPIIYPQGFQAYNARWPMPFQQSASTSNLYYSFEVVATHVIMLGSYADFHAQSQQYMWLQSDLANIDRVKTPWVIVLLHAPWYNTNQAHQGEGESMRQAMEQLLYNARVDLVFAGHVHAYERFTRIYDNKVDSCGPMYVTIGDGGNREGLALMFKNPPSRLSLYREPSFGHGRLRILNETHAHWSWHRNNDTDAVVADGVWIESLSSSEFCLKQQPNEEL* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00635 485 SUPERFAMILY Metallo-dependent phosphatases 192 457 IPR029052 -
Lapu6g00635 485 PANTHER ACID PHOSPHATASE RELATED 58 468 IPR039331 GO:0003993
Lapu6g00635 485 Pfam Purple acid Phosphatase, N-terminal domain 99 182 IPR015914 GO:0003993|GO:0046872
Lapu6g00635 485 Gene3D - 98 189 - -
Lapu6g00635 485 CDD MPP_PAPs 192 469 IPR041792 -
Lapu6g00635 485 Gene3D - 190 475 IPR029052 -
Lapu6g00635 485 SUPERFAMILY Purple acid phosphatase, N-terminal domain 90 188 IPR008963 GO:0003993|GO:0046872
Lapu6g00635 485 Pfam Iron/zinc purple acid phosphatase-like protein C 400 459 IPR025733 -
Lapu6g00635 485 Pfam Calcineurin-like phosphoesterase 195 385 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00635 Lapu-Chr6 6662578 6666735 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00635 201 459 Miscellaneous Gene Families AT2G03450 29.900 1.79e-26 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00635 K22390 - gmx:100819446 853.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00635 6 6662578 6666735 Lapu6g00635 6 6662578 6666735 ECH