Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00625 ATGGAGGTCTCAGACGACGACGACGGCCACGTTTTCCTTCTTTGTACTAACACTGATTCAATCCAAACAACCAAAACCCTAAACGATGAGATTCTCGTGTCCACCGCCAATATCCTCGCTTGGGATCTCCCAACGATTCTCACTTTTCCCACCATTAAAGTTCAGGCACATCGTAATAGGCTAATTGAACAATCTATGTATTTCCGCGGCCTCCTCAGCGGGAACTTCAGTGAATCATGCTTGGGCTCTATCTCTATCAATTGGAATGTGAGCGAATTTTTGCAAATTCTTAAGCATATATGTGACTGCGTTTTGGATATTACGTTGGATAATTTCTTCCCTCTTTATGAGGGTGCGCTTTATTTTGGAGTGGAGTCACTTCTCTTGAAGTGTGAGATGTGGCTTTCTGAGGTGCTCTCACCCGAAGGATTTCAATCAACTCAAATAAAAATTGAGAACTTGATCCAAATTTGGAAATTTGGCTCAGATCGCGCAAGCGACTATATCCTGCACTTATGTATGGGCTACCTAGCAAGAAATTTTATGTGGGCGAGGTGTAGCAATTTCTTTGTAAAACTTCCATATGGCCTGCTGTTATCTTCTGTAAAGCACCCTCATTTGACTGTTGACAGTGAACTGCATCTTTCTGATGCACTTCTTCTATGGCTTGAAAGTAGCTCGGAAAATTGGGAGAGGCCAAGCAAAACTGAAGACAATTGCAATGGACTTTTGAAACAAATTCGTGTGAGCCTTTTGCCTTTGTGGTTTACTCTAGGAAAAAGAAACTCTTTTTATTTTAGACAGCTGGCTGAGGAAAGCCTTGATTCAATTTTCAGACTACTAAATATTGTTCCTGTTGGTTCACTCGATACTTTCAAGTATAGTGACTTGCATCATCTCAGGATTAGGTTGACAGAATATTCAAAGAAAGTGAACCTTTCTGGTTGCCCACAAATAACATCTACAATACTTCGTCTGTCATTCATCCCTCAATCATATTTAACCGATCCCATGCAAAAGAAGATTATAAAGCAGTTATTTATTAATTGTGAACATCCTATAAGAGATAAATGCGTGTTCCCACAAAATCTGTCTGAAGAAACCATGACCTATGAAGAAGTTCAGGAGGTGGATATCTCTAAGTGTCGAAATTTGCATATTGAACATGCTGTTGATTGCTTCCGCAAGTCCTTTCCTTCTTTAAGAACATTGAAAGCAGGTTATCTTTTGAACATTGGGACAATCAGTTTCCTTCAGTTATTAGAGAAATGTCCGATGGTTTGTGAAATTGACTTGACTGTTGATATTACCCCACTGATACCAGCATCAGTTACAGTCTTATCCTCTAGTCCCACTGAGATACAACCAGTACCAGAGAAGACCTCTAGTGTTAAATGTAAAGCAGTGCAAATCATGTCATTTAATGAATTAGGACCTCCTCTTTCGAATGTTACAAAACTCACGTTGGAAGGAAGAACTGATATCAGTGATTTGGGTCTCCACTACATCTCCAACTTATGTGTTTCGTTGTGTCACCTGAATATTAAAGGATGCATTTCTGTCACCGATATTGGCATATCAGATCTCATATCCATGAGTAAAAAACTTAATTCAATTGTGGTTTGTGATACTTCATTTGGGATAAATTCAGTTCAAGCTCTTTGCTCAGCTATTTCTGATAGTGGCAACATCTCCTCTCTACATTCTAGAGATAAGCGTTTGAATTCTGTGGTGTCTAATTTTGAAACCTTACATATGGGTGGCTGCCAGGGTGTTTCTGAGTCATCTCTAGTAGAGCTTATGTCTCAAACACAAGTTTTGAAGAGTTTGTGCCTGAGAGGAACTAACCTGATTGACCAGGCACTGTATAATTTTATAGGTTCTTCCTTGGAGATGCTTGATATTTCAAATACTAAGATTTCTAGTGCTGCATTAACTTATGTTATTCAAGGAAATCCAAGTTTAAAGTGTCTGAAAGCAAGAGACTGTCGAAATTTGTTTCCAGGAGATAATTGTACTGAAAAGAGAGAATCTGGTTTTCCCTCTTTGCTTGAAAAACTACATGCTGAATTAGGAAAAATATGTAGATTGGAAGAGATTGAGCTTGGATGGGGCTTTTCTTCCTTCTCTTTGAGTTCTCTGGAGCCTGCACTGATGTCATTAAAGGCCATCAATATAGGTTTAGGTGGAATGCTAGGTGAAGATGCTTTGAAACGATTACCTGCAATCTGTCCCTTGCTAGAAACAATAATCCTTCATTTTCAGGTAATATCTGATATAATCGTGATGAACTTTGTTGCATCGTTGAAAAACTTGCAAGTACTAGCTATGTGCTATTGTTTTGGTGATATATCCATGTCAAGCTTCAAATTCCCGATGCAAAATCTTAGAAAGCTGAGGCTTGAAAGAGTAACCCCATGGATGGCGAATGATGATTTGGATGTTCTCACTCAAAACTGCAGAAATTTGGCTGAGCTTTCATTGCTAGGGTGTTCTCTTCTTGACTCAGACTCTCTACGGATAATTTCGCGTGGATGGCCAGGCTTGGTCTCTATCCATTTAGAGGACTGTGGAGAAGTAACAGCTAATGGGGCTTCTGCTCTTTTTGATTGCAAAGCTCTTGAAGATATCCTGCTGCGTCATAATGGCCCTGGGCTGCACAGAAACTTCATTTGTTATGCTGCTTCAGAGATGCCATTGCTTCGAAAATTGTCACTGGATGTATGCGATGCAAGGGAAGGTGATTTTGACATTCCAAATTATGCAGGCAGATACTTTTTGAGTGCCTTAAACATAGCTAGATGCAAATCTCAACGATGTGCATTTAATCCCCCAGCCTCTACCGCAGGGGCTCGCAGGAGATCCGTGCATATCGAAACGCTGGTGCTCGTGTGGAACAGCAGAGATCTCATCAGAACCGTGGTGAAGGAAAGACTTTAA 2940 0.4014 MEVSDDDDGHVFLLCTNTDSIQTTKTLNDEILVSTANILAWDLPTILTFPTIKVQAHRNRLIEQSMYFRGLLSGNFSESCLGSISINWNVSEFLQILKHICDCVLDITLDNFFPLYEGALYFGVESLLLKCEMWLSEVLSPEGFQSTQIKIENLIQIWKFGSDRASDYILHLCMGYLARNFMWARCSNFFVKLPYGLLLSSVKHPHLTVDSELHLSDALLLWLESSSENWERPSKTEDNCNGLLKQIRVSLLPLWFTLGKRNSFYFRQLAEESLDSIFRLLNIVPVGSLDTFKYSDLHHLRIRLTEYSKKVNLSGCPQITSTILRLSFIPQSYLTDPMQKKIIKQLFINCEHPIRDKCVFPQNLSEETMTYEEVQEVDISKCRNLHIEHAVDCFRKSFPSLRTLKAGYLLNIGTISFLQLLEKCPMVCEIDLTVDITPLIPASVTVLSSSPTEIQPVPEKTSSVKCKAVQIMSFNELGPPLSNVTKLTLEGRTDISDLGLHYISNLCVSLCHLNIKGCISVTDIGISDLISMSKKLNSIVVCDTSFGINSVQALCSAISDSGNISSLHSRDKRLNSVVSNFETLHMGGCQGVSESSLVELMSQTQVLKSLCLRGTNLIDQALYNFIGSSLEMLDISNTKISSAALTYVIQGNPSLKCLKARDCRNLFPGDNCTEKRESGFPSLLEKLHAELGKICRLEEIELGWGFSSFSLSSLEPALMSLKAINIGLGGMLGEDALKRLPAICPLLETIILHFQVISDIIVMNFVASLKNLQVLAMCYCFGDISMSSFKFPMQNLRKLRLERVTPWMANDDLDVLTQNCRNLAELSLLGCSLLDSDSLRIISRGWPGLVSIHLEDCGEVTANGASALFDCKALEDILLRHNGPGLHRNFICYAASEMPLLRKLSLDVCDAREGDFDIPNYAGRYFLSALNIARCKSQRCAFNPPASTAGARRRSVHIETLVLVWNSRDLIRTVVKERL* 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00625 979 Gene3D Potassium Channel Kv1.1; Chain A 15 141 IPR011333 -
Lapu6g00625 979 SMART LRR_CC_2 820 845 IPR006553 -
Lapu6g00625 979 SMART LRR_CC_2 627 651 IPR006553 -
Lapu6g00625 979 SMART LRR_CC_2 846 871 IPR006553 -
Lapu6g00625 979 SMART LRR_CC_2 578 603 IPR006553 -
Lapu6g00625 979 SMART LRR_CC_2 481 506 IPR006553 -
Lapu6g00625 979 SMART LRR_CC_2 507 532 IPR006553 -
Lapu6g00625 979 Gene3D Ribonuclease Inhibitor 561 943 IPR032675 -
Lapu6g00625 979 PANTHER UNCHARACTERIZED 233 689 - -
Lapu6g00625 979 SUPERFAMILY RNI-like 687 936 - -
Lapu6g00625 979 CDD BTB_POZ_ZBTB_KLHL-like 51 122 - -
Lapu6g00625 979 Gene3D Ribonuclease Inhibitor 461 560 IPR032675 -
Lapu6g00625 979 Pfam BTB And C-terminal Kelch 155 256 IPR011705 -
Lapu6g00625 979 SUPERFAMILY POZ domain 50 136 IPR011333 -
Lapu6g00625 979 Gene3D - 149 273 - -
Lapu6g00625 979 SUPERFAMILY RNI-like 472 726 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00625 - - gmx:100791594 1563.9