Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00619 ATGCAGAGTGAGCAACAGAGCAACAACAACAACCAGTTGGTAGTGCAGAATTCGGGGAGCCTAAGCTTCAGCAGCCATTTGTCGAAGGAAGATGAAGAGATGTCAAGGTCTGCTCTGTCCACCTTCAGGGCCAAGGAGGAAGAGATTGAAAGGAAGAAGATGGAGGTCAGAGAAAAGGTTCAGCTTCAGTTGGGTCGTGTTGAGGAAGAAACCAAGCGTCTTGCCACCATTCGTGAGGAGCTTGAAGCTCTGGCAGATCCAATGAGGAAAGAAGTTGCACTCGTTCGAAAAAAGATTGATTCCGTAAACAAAGAATTAAAGCCACTGGGTCATGCCTGCCAGAAGAAGGAGAAAGAATACAAAGACGCCCTTGAAGCTTTTAATGAAAAGAACAGGGAAAAAGTACAGCTAATCACCAAGTTGATGGAGTTGGTGAGTGAGAGTGAAAGATTGAGGATGAAGAAGCTGGAGGAGCTGAGTAAGAACGTAGATTCGATGCAATGA 504 0.4563 MQSEQQSNNNNQLVVQNSGSLSFSSHLSKEDEEMSRSALSTFRAKEEEIERKKMEVREKVQLQLGRVEEETKRLATIREELEALADPMRKEVALVRKKIDSVNKELKPLGHACQKKEKEYKDALEAFNEKNREKVQLITKLMELVSESERLRMKKLEELSKNVDSMQ* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00619 167 Pfam Transcriptional activator 16 165 IPR007033 -
Lapu6g00619 167 Coils Coil 113 133 - -
Lapu6g00619 167 Coils Coil 39 59 - -
Lapu6g00619 167 MobiDBLite consensus disorder prediction 1 45 - -
Lapu6g00619 167 PANTHER RAB6-INTERACTING PROTEIN GORAB 4 165 IPR007033 -
Lapu6g00619 167 MobiDBLite consensus disorder prediction 1 25 - -
Lapu6g00619 167 MobiDBLite consensus disorder prediction 26 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00619 Lapu-Chr6 6450330 6453568 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00619 - - gmx:100499923 289.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00619 6 6450330 6453568 Lapu7g01764 7 33293165 33295050 ECH
Lapu6g00619 6 6450330 6453568 Lapu6g00619 6 6450330 6453568 ECH