Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00611 ATGTGCAACATGTTTGCTGGTCATCAGCCTCGGTTTATGGTGGTTCTATTTCTGTCCATCGAGATTATCACGTTGAGATGCACTTCCATCACGCAAGAGCTTCACAAGGGCTTCTCGGCGACACCGGAGGCTTCAACGGCGTCGTTTCAGGCAGTTCTGAGTGACCCCAGCGGAAACTTCTCTCTAGGCTTCCTCCGCGTGAACCGTAACCAGTTGGCACTAGCCATCCTCCACGTGGCATCCTCGGAGACTTTCTGGGTGGCCAACCCAACTCGTGCAGCGTCCTGGTCCGACACCACGCGCCTCTTCTTCAACGGCAGTCTCGTGCTGTCGGATCCGGAAACGCGCGTTTCCTGGTCAACCGCGACAAACGGAGACCGCGCGGTGCTCCTCAACACGTCCAACTTGCAGGTCCAAAGCGAAGGAAGTGGCATCTGGGAGAGTTTTGACTTTCCCACAAACACCCTGGTCCAAGGCCAGAATTTGACCTCCAAAATGTCTTTGTTATCCTCCAACGGATTATATTCGTTGCGGTTAGGCAACGATTTCATGGGACTATACGAAAGCAACGAGTATTTATATTGGAAACGCACGGTACTTGAGACGAAAGCGGAAGTGAAGGAAGGGAAGGGACCGATTTACGCCCGAGTCAACCCGGAGGGTTACCTCGGGATGTATCAGACAAACGACGAGAAGCCCGCGGATGTTCAAAAGTTCAACAGCTTCCAACAGGCTGTGACAGCGGCGTCGTTTTTGTTCGTGCGGATGGAACCGGACGGGAATTTGAAAGCTTATTACTGGGACGGTTCCAACTGGCTGACTAACTACCAGGCTATTTCTGAGACCTGCGAACTCCCCCGCTCCTGCGGTTCCTACGGTTTGTGCACGCCCGGCGGCTCTGGATGCTCCTGTTTAGATAACCGGACCCGGTTCGAACCGGGTGGATGCTTCAACGATGTTGGTGGAGACTTGTGTAAGGAAGACCGGATTGGTGGGAGTGAAAGCGGTTACTGGGTGCTGAGAAGGAGCGGGGTGGAGCCACCGCATAAGGAGCTCCTTAGGCACGTAACGACGTCGTCTTTAGCGGAATGCGAGCAGTTGTGCCAGAACAACTGTAGCTGTTGGGGAGCGCTGTATAACAACGGCACCGGGTTTTGCTACATGTTGGACAGTCCGACCCAAACCATGTTGGGTAGCGGAGATGCGTCAAAAGTGGGGTATTTCAAAGTTAAAAAGGGAGAACGAGAAAAGAATCGGGTTTGGGTACGGGTTGGAGTTGTGATTACGGTTCTGGTAACGGTTGGGATTGTGATTGTCGGGACGGGGTTTTGTGTGAGTCGATGGAAAAAGAGAAGTGGAGTGAAGGAAGAGGATTGGGCCTCGCCCGGCCCGTATAAGAATCTTGGATCTGCGAGTTTTAGATCGATCGAGATGAGCAACAGTGCGGGGTAA 1452 0.5317 MCNMFAGHQPRFMVVLFLSIEIITLRCTSITQELHKGFSATPEASTASFQAVLSDPSGNFSLGFLRVNRNQLALAILHVASSETFWVANPTRAASWSDTTRLFFNGSLVLSDPETRVSWSTATNGDRAVLLNTSNLQVQSEGSGIWESFDFPTNTLVQGQNLTSKMSLLSSNGLYSLRLGNDFMGLYESNEYLYWKRTVLETKAEVKEGKGPIYARVNPEGYLGMYQTNDEKPADVQKFNSFQQAVTAASFLFVRMEPDGNLKAYYWDGSNWLTNYQAISETCELPRSCGSYGLCTPGGSGCSCLDNRTRFEPGGCFNDVGGDLCKEDRIGGSESGYWVLRRSGVEPPHKELLRHVTTSSLAECEQLCQNNCSCWGALYNNGTGFCYMLDSPTQTMLGSGDASKVGYFKVKKGEREKNRVWVRVGVVITVLVTVGIVIVGTGFCVSRWKKRSGVKEEDWASPGPYKNLGSASFRSIEMSNSAG* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00611 483 Gene3D - 40 150 IPR036426 -
Lapu6g00611 483 Gene3D - 151 277 IPR036426 -
Lapu6g00611 483 Pfam S-locus glycoprotein domain 247 306 IPR000858 GO:0048544
Lapu6g00611 483 Pfam PAN domain 356 395 IPR003609 -
Lapu6g00611 483 Pfam D-mannose binding lectin 85 167 IPR001480 -
Lapu6g00611 483 ProSiteProfiles Bulb-type lectin domain profile. 38 159 IPR001480 -
Lapu6g00611 483 SMART blect_4 44 152 IPR001480 -
Lapu6g00611 483 SMART ntp_6 332 411 IPR003609 -
Lapu6g00611 483 PANTHER OS07G0415500 PROTEIN 16 452 - -
Lapu6g00611 483 SUPERFAMILY alpha-D-mannose-specific plant lectins 83 269 IPR036426 -
Lapu6g00611 483 PIRSF SLG 5 424 IPR035446 -
Lapu6g00611 483 ProSiteProfiles PAN/Apple domain profile. 325 412 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00611 Lapu-Chr6 6359578 6361851 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00611 - - gmx:100812159 734.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00611 6 6359578 6361851 Lapu6g00611 6 6359578 6361851 ECH