Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00584 ATGGGTACTGGTACATGGGCTCCTGGGGCATCTTCTTCCTTGAAGCTCTTTCTGTTCATGGTGCCTCTCGTGCTTGTTGCAGGGCTTGTTTCTGTTTTGGGTCCTAACCCCTCTAGTTGGCTTTTCATTGTCAAACCACCTGTGTCATTATTCAGCTCTGTTACTTCCTCAACAGCTAGTAGTGGTGCTGTGACCACCCCTTCTCAGGTGAAGCAGAGAGAAGGGTTGGTGGTGGTGGCCGTGGATAATCGTGCTGGAGAGAATGTCATCTCTGATGACACTCACTTCAATCTCTCCTCAACTCCTCCATTTTCGGTTCAGGCCATACAATCACCTCATCAACACGTGATAACGACCCATCGTTTGATTTACCAGAACAACGATGAACAAAGCGTGAACGAGTCTTACATTCCAGCAGAGAGGCCAAAGCTGGAAAGAAAAATCAGCATCTTAGATAGAATCGAAGCAGGTCTAATAAAAGCTCGAGCAGCAATTAGAGAAGCCAGAAACGGAAACCAAACACAAGATACAGACTATGTTCCTATTGGACCAATGTATATGAATGGCAACGCATTTCACAGGAGTTACTTGGAAATGGAGAAACAGATGAAAGTATATGTGTACGAAGAAGGGGAGGCTCCAGTTTTTCATAACGGACCTTGCAAAAGCATATACTCCATGGAGGGGAATTTCATCCATGGTATTGAGATGAATGAGAAATTCCGAACAAGAGATCCCGAGAAAGCACACGTGTTTTTCTTACCTTTCAGTGTGGCAATGTTGGTCCAATTTGTGTATGTGCGTGACTCTCATGACTTTGGCCCCATAAAAAAAACTGTCACCGATTACGTGGACGTCATCGCAGGAAGATACCCCTATTGGAATAGAAGCCTTGGAGCTGATCATTTCTACCTTGCTTGCCACGATTGGGGGCCAGAGACTTCGCGTTCTGTTCCTAATCTGCAAGATAATTCCATACGTGTGTTGTGCAATGCTAACACTTCTGAGGGATTCAAGCCTTCCAAGGATGTTTCTTTGCCGGAAATTAACCTCCAAAGTGGTTCCATAAACGGTTTGATTGGTGGGCCGTCTGCTTCCAAACGTCCACTCTTGGCCTTCTTTGCTGGTGGGCTTCACGGCCCAATTAGGCCCGTCCTTCTTGAACAGTGGGAAAACAAGGACGAGGAGATGCAGGTTCACAAGTACCTTCCGAAGGGTGTCTCCTACTACGAGATGCTGAGGAAGAGCAGGTTCTGCCTTTGTCCCAGTGGGTACGAGGTAGCAAGTCCCAGAGTAGTGGAGGCAATCTACACAGGGTGTGTCCCAGTTCTCATCTCAGATCACTATGTCCCTCCATTCAGTGATGTATTGAATTGGAAGTCCTTTTCCGTGGAGGTTTCGGTTGAGGACATTCCCAGATTGAAGGAAATTTTGTTGAGTATTTCTCCAAGACAGTATATAAGAATGCAGAGGAGAGTGGTACAAGTTAGGAGGCACTTTGAGGTGCACTCTCCTCCCCAGAGATTCGATGTCTTTCACATGATCCTTCATTCTGTATGGCTTAGAAGATTGAACTTTAGAGTCCACCATGATCAATAA 1599 0.4603 MGTGTWAPGASSSLKLFLFMVPLVLVAGLVSVLGPNPSSWLFIVKPPVSLFSSVTSSTASSGAVTTPSQVKQREGLVVVAVDNRAGENVISDDTHFNLSSTPPFSVQAIQSPHQHVITTHRLIYQNNDEQSVNESYIPAERPKLERKISILDRIEAGLIKARAAIREARNGNQTQDTDYVPIGPMYMNGNAFHRSYLEMEKQMKVYVYEEGEAPVFHNGPCKSIYSMEGNFIHGIEMNEKFRTRDPEKAHVFFLPFSVAMLVQFVYVRDSHDFGPIKKTVTDYVDVIAGRYPYWNRSLGADHFYLACHDWGPETSRSVPNLQDNSIRVLCNANTSEGFKPSKDVSLPEINLQSGSINGLIGGPSASKRPLLAFFAGGLHGPIRPVLLEQWENKDEEMQVHKYLPKGVSYYEMLRKSRFCLCPSGYEVASPRVVEAIYTGCVPVLISDHYVPPFSDVLNWKSFSVEVSVEDIPRLKEILLSISPRQYIRMQRRVVQVRRHFEVHSPPQRFDVFHMILHSVWLRRLNFRVHHDQ* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00584 532 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 44 519 IPR004263 GO:0006486|GO:0016757
Lapu6g00584 532 Pfam Exostosin family 200 479 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00584 Lapu-Chr6 6080620 6083833 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00584 - - gmx:100806278 869.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00584 6 6080620 6083833 Lapu6g00584 6 6080620 6083833 ECH
Lapu6g00584 6 6080620 6083833 Lapu7g01105 7 22176924 22178060 PCT