Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00579 ATGGGGAGGAGTAGGGAAAGAGACCGAAGACGAAGAAGATCGGAGGAGTCCGAATCTGAGTCACCGTCCGATTCCGATTCGGACCGACGCCACCGTAGCAGTAGCCGCCGGTCACGGCGTGATTCCGATAGTGATAGGAAGAAGAAGAAGTCCTCGAGGAACATCACAGAAGAGGAAATCGCGCAGTACATGGCCAGAAAGGCCCAAACAAAGGCTATGAAAGTCGCGAAGAAGTTGAAAACGAGTACGGTATCGGGCTATTCCAACGATTCGAATCCGTTTGGTGACTCCAATCTCAATGAGAAGTTTGTTTGGCGCAAGAAGATTGAACGCGATGTTTCTCAAGGTGTGTCTATTGAAACGTTTTCAGTTAAGGCCGAGAAAAAGAGACAGATTGAAAGGATGGCAGAAATTGAAAAAGTGAAAAAGAGAAGAGAGGAAAGGGCACTTGAGAAAGCACGGCACGAGGAAGAAATGGCACTGTTAGCTAGAGAACGTGCTCGAGCGGAGTTTCAGGACTGGGAAAAAAAAGAAGAAGAGTTCCATTTTGATCAAAGCAAAGTTAGGTCAGAAATTAGATTGCGTGAAGGGCGTGCCAGACCAATTGATGTCCTAACCAAGCATCTCAATGGCTCTGATGATTTGGATATAGAAATAAATGAACCATATATGGTCTTCAAGGGTTTGACTGTAAATGAAATGAACGAGCTGCGTGATGACATTAAAATGCATCTGGACCTTGATAGGGCAACACCAACTCATGTAGAATATTGGGAGGCGCTCCTTCTGGTGTGTGATTGGGAGCTAGCTGAAGTGCGAAAAAAGGATGCACTTGATCGAGCTAGGGTGCGTGGAGAAGAACCTCCTGCTGAGCTTCTTGCAGAAGAAAGGGGATTGCATTCCAGTGTTGAGCCGGATGTGAAGAGGCTTTTGCAGGGGAAGACACATGCTGAATTGGAGGCTTTACAGGTTCACATTGAATCAGAAATGCGTTCTGGTACAGCTAAGGTGGTTGAGTACTGGGAGGCCATTTTAAAACATCTCCACATTTACAAAGCCAAGGCTTGTTTAAAGGAAATTCATGCTAAATTGCTACGTAAGCATTTGCAATCTCTGGAGAGACCATTGGAGGATGAAGATAAATTGGAGGATGCTAATGTTATGATACCTGAGGAGGAGGAAGATGCCGAGGATGATATTAAAGTCCAATCTCCAGATGAATCATTTTCACCAGAGCCCATTAGAGAGGAGCAAGAAGCTGACGATGAGGCTGGATCATTTTCACCACAACTGTTGCATGGTGATGAAAGTGAGGAAGCTATTGACCCCGAAGAGGACAGAGCCATGCTGGAGCGGAATCGTAAGGCTGTCTTAGAAGAGCAGCAAAGACGAGTTCAGGAAGCAATGGCATCAAAGCCAGCTCCTTCTGAAGATAATTTTGAGATGAAGGCTTTGAAAGCAATGGGAGATATGGAAGATGGAGATGCTGTGTTTGGATCTGGTGCTGAAGTAAACCTGGATTCCCAGGTTTATTGGTGGCATGACAAATACAGGCCTAGGAAGCCGAAGTATTTCAACCGTGTTCACACTGGATACGAGTGGAACAAATATAATCAGACTCACTATGATCATGACAACCCACCCCCAAAGATTGTGCAGGGATACAAATTTAATATTTTCTATCCTGATCTTGTAGACAAGACAAAAGCCCCAACCTACACCATTGAGAAGGATGGCAGCAATGGTGAGACCTGCATTATAAGATTCCATGCTGGGCCACCATACGAAGACATAGCTTTCCGCATCGTAAACAAAGAATGGGAATATTCTCATAAGAAAGGTTTCAAGTGCACATTTGAACGTGGAATTCTGCATGTGTACTTCAATTTCAAACGCCACCGCTACCGCAGATAA 1914 0.4498 MGRSRERDRRRRRSEESESESPSDSDSDRRHRSSSRRSRRDSDSDRKKKKSSRNITEEEIAQYMARKAQTKAMKVAKKLKTSTVSGYSNDSNPFGDSNLNEKFVWRKKIERDVSQGVSIETFSVKAEKKRQIERMAEIEKVKKRREERALEKARHEEEMALLARERARAEFQDWEKKEEEFHFDQSKVRSEIRLREGRARPIDVLTKHLNGSDDLDIEINEPYMVFKGLTVNEMNELRDDIKMHLDLDRATPTHVEYWEALLLVCDWELAEVRKKDALDRARVRGEEPPAELLAEERGLHSSVEPDVKRLLQGKTHAELEALQVHIESEMRSGTAKVVEYWEAILKHLHIYKAKACLKEIHAKLLRKHLQSLERPLEDEDKLEDANVMIPEEEEDAEDDIKVQSPDESFSPEPIREEQEADDEAGSFSPQLLHGDESEEAIDPEEDRAMLERNRKAVLEEQQRRVQEAMASKPAPSEDNFEMKALKAMGDMEDGDAVFGSGAEVNLDSQVYWWHDKYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTIEKDGSNGETCIIRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRHRYRR* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00579 637 PANTHER POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3 42 637 - -
Lapu6g00579 637 Pfam Cactus-binding C-terminus of cactin protein 513 637 IPR019134 GO:0005515
Lapu6g00579 637 Pfam Conserved mid region of cactin 164 361 IPR018816 -
Lapu6g00579 637 SMART CactinC_cactus_3 513 637 - -
Lapu6g00579 637 Coils Coil 136 172 - -
Lapu6g00579 637 MobiDBLite consensus disorder prediction 391 445 - -
Lapu6g00579 637 MobiDBLite consensus disorder prediction 1 62 - -
Lapu6g00579 637 MobiDBLite consensus disorder prediction 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00579 Lapu-Chr6 6032905 6039806 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00579 K25058 - gmx:100780087 1103.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00579 6 6032905 6039806 Lapu6g00579 6 6032905 6039806 ECH