Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00576 ATGAAGATCCTCCACAAAGATTTCGCCCTCAACCAAACCGGAACTGCCAAGCTCATGGCTGAAGAACCCGACGACGTCTGGGTCCTCTACAACCTCATCGTCCCCGGCGACGTTGTTTCCGCCGACACCACGCGCAAGGTCCACCTCGATTCCTCCACCAAGAAAAACACCGCCTCACGTGTCAAGCTCACCCTCCACCTCAAAGTCACGTGCCGCGACTTCCACAAAGACTCCTCCACTCTCCGCCTCCACGGCCGCAACCTCCACTCCAACCAACACGTCGCCGCCGGCTCCTTCCACACGCTCTCCCTCGAACCCAACAGACCCTTCCTCCTCCGCAAAAATCTCTGGCAAAACGATGTTCTCCAAACCCTAAACGACACCACCCAAACAGAACATTCCAAATCAAATTCCGCTTCCATTTCCGACCTCGCTGTCGTTCTCTTCCACCCGCACCACGCCGAAATCCACCTCGTCGCCGAAGGAGCCAGCACACGCTGCACCAAGGTCGAATCCTCTCCCAACTCCAGAAAAAACGGAAACGTTTCTTCGTCCGTATTTTTCCGCCGAGTGTTCGCAGCGTTGGTGAAGCGCGTGGATTTCAAGGTTGTGAGGACCGTGGTGGTGACGAGCGAGGAGTTTCGTAGGTTTGCAGTGACGGAAGCGAGGAAGTTGAGGGTACGGTGGATCGAGGATAACAAGACGCGCCTGGTGGTCGTGGAGGATAGTGATAGTTTGGAGAAAGTTTTGAGTGACCCTGCGGTGACGGAGTTGGTGAACGACAGCAGGATTGGGGCGTTTAGGGAGTTGTGGGAGATGGTGTGCAACGATTCTGGCCGCGCGTGTTATGGAGACGAGGAGGTGGTGCGTGCGAAAGAGATGAGAGCGATTGAGACACTTTTGATTACCGATGATCTTTATAGGAACGAGGAAGTTGGTACGAGGCAGAGGTACGCGGGTTTGGTGAAATCGGTGAAAGACGGTGGAGGAAAGGCTTTGGTGTATTCGCCGATGCATGTTTCGACGCCGCAACTGGCGCAGCTCACCGGCGTTGCGGCCATCCTCCGGTTTCCCTTGCCTGACCTCGAATTCCAAGATGGAAATGGTGTTAAATAA 1116 0.5511 MKILHKDFALNQTGTAKLMAEEPDDVWVLYNLIVPGDVVSADTTRKVHLDSSTKKNTASRVKLTLHLKVTCRDFHKDSSTLRLHGRNLHSNQHVAAGSFHTLSLEPNRPFLLRKNLWQNDVLQTLNDTTQTEHSKSNSASISDLAVVLFHPHHAEIHLVAEGASTRCTKVESSPNSRKNGNVSSSVFFRRVFAALVKRVDFKVVRTVVVTSEEFRRFAVTEARKLRVRWIEDNKTRLVVVEDSDSLEKVLSDPAVTELVNDSRIGAFRELWEMVCNDSGRACYGDEEVVRAKEMRAIETLLITDDLYRNEEVGTRQRYAGLVKSVKDGGGKALVYSPMHVSTPQLAQLTGVAAILRFPLPDLEFQDGNGVK* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00576 371 SUPERFAMILY Translational machinery components 142 263 - -
Lapu6g00576 371 SUPERFAMILY L30e-like 266 362 IPR029064 -
Lapu6g00576 371 Pfam eRF1 domain 1 1 127 IPR005140 -
Lapu6g00576 371 SUPERFAMILY Dom34/Pelota N-terminal domain-like 1 128 IPR038069 -
Lapu6g00576 371 Gene3D eRF1 domain 2 142 259 IPR042226 -
Lapu6g00576 371 Gene3D - 262 370 IPR029064 -
Lapu6g00576 371 FunFam Protein pelota homolog 260 370 - -
Lapu6g00576 371 Pfam eRF1 domain 3 268 359 IPR005142 -
Lapu6g00576 371 FunFam Protein pelota homolog 1 131 - -
Lapu6g00576 371 SMART eRF1_1_2 1 130 IPR005140 -
Lapu6g00576 371 Gene3D Pelota, domain A 1 131 IPR038069 -
Lapu6g00576 371 PANTHER PELOTA 1 363 IPR004405 GO:0070481|GO:0070966|GO:0071025
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00576 Lapu-Chr6 6012066 6013738 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00576 K06965 - gmx:100803618 525.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00576 6 6012066 6013738 Lapu6g00576 6 6012066 6013738 ECH