Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00574 ATGTTCAGATTCTGGGGATCGCAAGAGCAACAATCACAGGATGGTTCTTCGCAGTCACAGTCATGGTATCCACCATCGGTGGTAAGTTCACCAAGTTCGTCAAGGCCTGTTACACCATCTGGATCTTCTTCATTATCACAGAGGCCTTCTTCTCATGTCCCACCTTCCGAAGCTGCTGGAGTTATTGCCGTTTTGAAGGACAAGAGTGTTGATGACTTGCGGAAGCTTTTATCTGACAAAGATGCATATCAGCAGTTTTTACATTCGCTTGATCAGGTCAAGATTCAAACTAATCTGAAAGACGAGCTTTGCAAGGAGAATTTACAGCTTGCAGTAGAGCTTAAACTATTGTCTACTGCAGAGGAAAATCTTCAAAAGGAACCTCGTATCATGGAACTTAGGAATCAATGTAGAATAATTCGGACAACTGAGTTAGCTGCAGCTAAGGAGAAACTAAATGAGCTTGAGAAGCAGAAAGAAGAAATGCTGAAGCTGAATTCGCCAGCATCCCTTATCCACAGGATTCAAGAGTCTGTGAATAAGACTGATGAGGAATCTGACAATCTACACCAGCATTTCCTTGACAGAGAGATTGATCTTGGGGCTTTCTTGCAAAAGTACAAGAAATTACGTACCACTTATCATAGAAAGACTCTCATACATCTTGCTGCTAAAACATCAACAGTATGA 690 0.4174 MFRFWGSQEQQSQDGSSQSQSWYPPSVVSSPSSSRPVTPSGSSSLSQRPSSHVPPSEAAGVIAVLKDKSVDDLRKLLSDKDAYQQFLHSLDQVKIQTNLKDELCKENLQLAVELKLLSTAEENLQKEPRIMELRNQCRIIRTTELAAAKEKLNELEKQKEEMLKLNSPASLIHRIQESVNKTDEESDNLHQHFLDREIDLGAFLQKYKKLRTTYHRKTLIHLAAKTSTV* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00574 229 MobiDBLite consensus disorder prediction 1 53 - -
Lapu6g00574 229 Gene3D Helix hairpin bin 154 222 IPR029012 -
Lapu6g00574 229 Pfam Modifier of rudimentary (Mod(r)) protein 66 218 IPR009851 -
Lapu6g00574 229 Coils Coil 138 165 - -
Lapu6g00574 229 FunFam Vacuolar protein-sorting-associated protein 37 homolog 1 153 222 - -
Lapu6g00574 229 SUPERFAMILY Endosomal sorting complex assembly domain 168 217 IPR037202 -
Lapu6g00574 229 ProSiteProfiles VPS37 C-terminal domain profile. 149 229 IPR009851 -
Lapu6g00574 229 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 37 15 227 - -
Lapu6g00574 229 MobiDBLite consensus disorder prediction 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00574 Lapu-Chr6 6003706 6008189 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00574 K12185 - gmx:100305851 316.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00574 6 6003706 6008189 Lapu6g00574 6 6003706 6008189 ECH