Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00543 ATGGATGAAGGAACTAAGAGAATGGAAGAAGGCCTCAATTCACCCTTAAATGATGATGGTAATAAGGATGAGTTGAAGAAGCAGGTAACCAGTAAAAGCAGCAACGGAGGTTCTTCTGAGCATGACAAAGACACAATGGCTAAGTTTGTGGCTGTGGATGAGTCAGAGCAACCACTGGTTAAGAAGAAGACCAAGAGGGTCGCAACCCTGGATGCATTTAGGGGTCTCACCATAGTGTTGATGATACTAGTAGACGATGCTGGTGAAGCTTATCCACGCATTGATCATTCCCCGTGGAATGGATGTACTTTGGCCGATTTCGTTATGCCTTTCTTTCTTTTCATTGTTGGGGTTGCCATAGCCCTTGCACTAAAGAGAATCCCCAAGATAAGGGATGCTGTAAAGAAGATAATCCTTAGGACAATGAAACTTCTCTTCTGGGGTATAATTTTGCAAGGGGGTTACTCTCATGCTCCCGATAATCTCGAATATGGAGTTGACATGAAATTTATCCGATGGTGTGGGATTCTTCAGAGGATAGCTCTAGTATACTGTGTTGTAGCTCTAATAGAAACATTTACCACCAAGCTTAGACCAACAACGTTGGGTTCTGGAAACCTATCCATTTTTACTGCTTATAAATGGCAATGGCTTGGAGGCTTTGTGGCATTTCTCATTTATATGATCACAACCTTCACCCTTTACGTTCCTGATTGGAGTTTCGTGGATCGTTTTAACGGCGATGAACCGAAGAGATACACGGTCATTTGTGGGATGAGAGGACATCTAGGGCCTGCATGTAACGCTGTTGGACACGTGGACCGACAGTCGTGTACACTCAGTTCTCCAGGAGATGGTGCTTTCCGTGAAGATGCTCCAAGCTGGTGTCGTGCTCCTTTTGAACCTGAAGGCTTGTTGAGTTCTATATCAGCTATCCTCTCTGGCACTATCGGCATCCACTATGGGCACGTCTTGATTCACTTTAAGGGTCATTCTCAGAGGCTAAAACAATGGATCTCAATGGGGTTTGTGTTACTAATAATAGCCATCATTCTTCACTTCACAGATGCTATCCCAATTAACAAGCAACTCTACAGCTTCAGCTATGTTTGTTTCACAGCTGGGGCAGCTGGAATTGTTTTCTCTGGGTTATACATACTGATTGATGTTTGGGGGCTCCGAACTCCATTTCTGTTCTTGGAATGGATAGGAATGAATGCTATGCTAGTATTTGTGATGGCAGCTGAGGGCATCTTCGCAGCATTTGTGAATGGATGGTATTATGAAGATCCACGTAACTCCCTAGTACACTGGATCAAGAAGCATGTGTTTGTCAATGTTTGGCACTCAGAGAGGGTGGGAACCATCTTGTACGTCATCTTTGCAGAAATCACATTCTGGAGTGTGGTTGCTGGCGTCTTACACAAATTAGGAATATATTGGAAACTATAA 1452 0.4373 MDEGTKRMEEGLNSPLNDDGNKDELKKQVTSKSSNGGSSEHDKDTMAKFVAVDESEQPLVKKKTKRVATLDAFRGLTIVLMILVDDAGEAYPRIDHSPWNGCTLADFVMPFFLFIVGVAIALALKRIPKIRDAVKKIILRTMKLLFWGIILQGGYSHAPDNLEYGVDMKFIRWCGILQRIALVYCVVALIETFTTKLRPTTLGSGNLSIFTAYKWQWLGGFVAFLIYMITTFTLYVPDWSFVDRFNGDEPKRYTVICGMRGHLGPACNAVGHVDRQSCTLSSPGDGAFREDAPSWCRAPFEPEGLLSSISAILSGTIGIHYGHVLIHFKGHSQRLKQWISMGFVLLIIAIILHFTDAIPINKQLYSFSYVCFTAGAAGIVFSGLYILIDVWGLRTPFLFLEWIGMNAMLVFVMAAEGIFAAFVNGWYYEDPRNSLVHWIKKHVFVNVWHSERVGTILYVIFAEITFWSVVAGVLHKLGIYWKL* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00543 483 MobiDBLite consensus disorder prediction 1 29 - -
Lapu6g00543 483 MobiDBLite consensus disorder prediction 1 44 - -
Lapu6g00543 483 Pfam Heparan-alpha-glucosaminide N-acetyltransferase, catalytic 66 196 IPR012429 -
Lapu6g00543 483 PANTHER LD22376P 45 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00543 Lapu-Chr6 5681903 5685915 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00543 K10532 - gmx:100819967 878.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00543 6 5681903 5685915 Lapu6g00543 6 5681903 5685915 ECH
Lapu6g00543 6 5681903 5685915 Lapu7g00578 7 6562664 6574913 PCT